Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   AKO65_RS00160 Genome accession   NZ_CP012329
Coordinates   29122..29913 (-) Length   263 a.a.
NCBI ID   WP_035391276.1    Uniprot ID   -
Organism   Bacillus altitudinis strain NJ-M2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 24122..34913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AKO65_RS00140 (AKO65_00140) - 26719..27702 (-) 984 WP_057078305.1 glycosyltransferase family 2 protein -
  AKO65_RS00145 (AKO65_00145) - 28004..28276 (-) 273 WP_017366871.1 YfhJ family protein -
  AKO65_RS00150 (AKO65_00150) - 28393..28542 (+) 150 WP_003217849.1 small, acid-soluble spore protein K -
  AKO65_RS19260 - 28568..28741 (+) 174 WP_003217811.1 YpzG family protein -
  AKO65_RS00155 (AKO65_00155) - 28804..29118 (-) 315 WP_035703753.1 YfhH family protein -
  AKO65_RS00160 (AKO65_00160) recX 29122..29913 (-) 792 WP_035391276.1 recombination regulator RecX Regulator
  AKO65_RS00165 (AKO65_00165) - 30009..30905 (+) 897 WP_057078306.1 TIGR01777 family oxidoreductase -
  AKO65_RS19265 - 30958..31068 (+) 111 WP_017358836.1 YfhE family protein -
  AKO65_RS00170 (AKO65_00170) - 31130..31285 (+) 156 WP_008341997.1 YfhD family protein -
  AKO65_RS00175 (AKO65_00175) - 31321..31908 (-) 588 WP_024720283.1 nitroreductase family protein -
  AKO65_RS00180 (AKO65_00180) - 32179..33435 (+) 1257 WP_035391280.1 transcriptional regulator -
  AKO65_RS00185 (AKO65_00185) - 33471..33938 (-) 468 WP_007496690.1 thiol-disulfide oxidoreductase DCC family protein -
  AKO65_RS00190 (AKO65_00190) - 34277..34825 (-) 549 WP_008341670.1 thioredoxin family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30629.99 Da        Isoelectric Point: 6.7746

>NTDB_id=153410 AKO65_RS00160 WP_035391276.1 29122..29913(-) (recX) [Bacillus altitudinis strain NJ-M2]
MPYITKISAQQNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKDIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPNDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLQRKGFSFDIIDKALQEAYDGQEEEKEEEALHYMLEKAKRKVGYDGSFEKKMK
VKQFLYRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=153410 AKO65_RS00160 WP_035391276.1 29122..29913(-) (recX) [Bacillus altitudinis strain NJ-M2]
ATGCCCTATATTACGAAAATCTCTGCTCAGCAAAACAATACAGAACGCGTGAACATCTTTCTTGATGAAAAGTACGCTTT
TAGCGTTGATCTAGATGTGCTCGTCCAGCATGATTTGAAAAAGGGAAAAGAGCTGGACGAAGCCGATATCATAGAGATTC
AATTCGGTGATGCAGTAAAAAAAGGATTTCAGCAGGCCGTCGATTATTTATCGTATCGGATGAGATCAGTGAAAGAAGTC
ACCGATTACTTGACGAAAAAAGACATACCAGCACCTGCTATTAGTGAAATTATACACAAATTAAAACATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCGTATGTAAGCACCCACCGAAAAACGAATAGCAAAGGCCCGTCAGTGCTAAAAAAAG
AATTAAAGCTGAAAGGCATAGACGATGACACCATCGAACAAGCACTATCGCAATATCCGAATGATTTGCAGCTAGAGGAA
GCAGTGAAACAAGTGCTAAAGCTGGTTAAGAAAGAGAAAAACCGGTCCGCAAAAGAAATTGAACAGCGTATCAAATTGCA
GCTTCAGCGAAAAGGATTTTCATTTGATATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTTCACTATATGCTTGAGAAGGCAAAACGCAAGGTAGGTTATGACGGATCATTTGAGAAAAAAATGAAA
GTAAAGCAATTCCTTTACCGAAAAGGTTTTGATCTTGATACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

63.118

100

0.631

Multiple sequence alignment