Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   V471_RS10260 Genome accession   NZ_CP015283
Coordinates   2175231..2176967 (-) Length   578 a.a.
NCBI ID   WP_084871493.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 25975     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2170231..2181967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V471_RS10240 (V471_10065) - 2170257..2171240 (-) 984 WP_084871491.1 rhodanese-related sulfurtransferase -
  V471_RS10245 (V471_10070) - 2171437..2172138 (-) 702 WP_060971296.1 glucosamine-6-phosphate deaminase -
  V471_RS10250 (V471_10075) queA 2172290..2173333 (+) 1044 WP_084871492.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  V471_RS10255 (V471_10080) rcrQ 2173431..2175218 (-) 1788 WP_060973332.1 ABC transporter ATP-binding protein Regulator
  V471_RS10260 (V471_10085) rcrP 2175231..2176967 (-) 1737 WP_084871493.1 ABC transporter ATP-binding protein Regulator
  V471_RS11255 - 2177165..2177320 (-) 156 Protein_1967 LysR family transcriptional regulator -
  V471_RS10270 (V471_10090) - 2177330..2178883 (-) 1554 WP_064524851.1 BCCT family transporter -
  V471_RS11345 - 2179000..2179122 (-) 123 WP_002269975.1 hypothetical protein -
  V471_RS10275 (V471_10095) rplL 2179333..2179701 (-) 369 WP_084871494.1 50S ribosomal protein L7/L12 -
  V471_RS10280 (V471_10100) rplJ 2179776..2180279 (-) 504 WP_004183007.1 50S ribosomal protein L10 -
  V471_RS11445 - 2180571..2180666 (-) 96 Protein_1972 ABC transporter permease -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64826.70 Da        Isoelectric Point: 5.1960

>NTDB_id=153207 V471_RS10260 WP_084871493.1 2175231..2176967(-) (rcrP) [Streptococcus salivarius strain ATCC 25975]
MAYIWSYLRRYPKWLAMNFTAAILFVIANLGLPTVLARMIDEGINRGDVDKLYAYAWVMFGVVLTGIVGRILLSYAVGKL
TTTMVQVMRNDIYAKLQEYSHYEYEQIGVSSLVTRITSDAFVLMQFADQVLKLGVITPLMMVSSVFLILTTSPSLAWIVA
ISLPFLAVVVWYVAVKTRPLSEKQQATLDKINQYARENLTGLRVIRAFAREDFQEKKFASENAVYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALEPLGSGTLAIGDLVAFIEYSFHALLSFLFLANLFTMYPRTAVSSERLQEIMDMPISINPNE
DGVTETETKGYLEFDNVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVQLIPRFYDVTLGRILVDGVDVRD
YNLKALRRKIGFIPQKALLFTGTIGENIRYGKENASHEELNQATDVAQAKEFIESKEERYDSHLAEGGSNLSGGQKQRLS
IARAVVKRPDLYIFDDSFSALDYKTDATLRRRLKEVTQDATVLIVAQRVGTIMDADQIIVLDEGEIVGRGRHEELMESND
IYREIANSQLNQKSLTED

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=153207 V471_RS10260 WP_084871493.1 2175231..2176967(-) (rcrP) [Streptococcus salivarius strain ATCC 25975]
ATGGCTTATATTTGGTCTTATCTCAGACGTTATCCTAAGTGGCTAGCAATGAATTTTACGGCGGCCATTTTATTTGTTAT
TGCTAACTTGGGTTTGCCGACGGTTCTTGCCAGAATGATTGATGAGGGAATAAACCGTGGTGATGTTGATAAGCTTTACG
CTTATGCTTGGGTCATGTTTGGTGTAGTTTTGACTGGGATTGTTGGTCGTATACTTCTGTCCTATGCGGTTGGTAAGTTG
ACCACTACTATGGTGCAAGTCATGCGTAATGACATTTATGCTAAGCTTCAGGAGTATTCCCACTACGAGTATGAGCAGAT
TGGGGTATCCTCTTTGGTGACTCGTATTACATCAGATGCTTTTGTGCTTATGCAGTTTGCGGATCAGGTTCTTAAGCTAG
GGGTTATCACTCCTTTGATGATGGTTTCCAGTGTCTTTTTGATTTTGACGACAAGTCCATCTTTGGCTTGGATTGTGGCA
ATCTCCTTGCCTTTCCTAGCCGTAGTAGTCTGGTATGTGGCGGTAAAAACGCGTCCGCTTTCTGAAAAACAACAGGCAAC
TCTCGACAAGATTAACCAGTATGCTCGTGAAAATCTGACTGGACTTCGTGTCATCCGAGCTTTCGCTAGAGAAGATTTTC
AAGAGAAGAAGTTCGCTTCTGAAAATGCTGTCTATGCGGATAATTCAAACAAGCTCTTTAAATTAACTGGTTTGACCGAG
CCACTTTTTGTGCAAATCATCATCGCTATGATTGTGGCAATTGTTTGGTTTGCTCTTGAGCCATTAGGTTCTGGGACTTT
AGCAATCGGTGACTTGGTTGCTTTTATTGAGTACAGCTTCCATGCACTATTGTCCTTCCTTTTCCTAGCCAATCTCTTTA
CCATGTATCCTCGTACAGCGGTATCTAGTGAACGTCTGCAGGAAATTATGGACATGCCGATTTCTATCAATCCAAATGAA
GATGGCGTGACAGAAACCGAGACTAAGGGATATTTGGAATTTGACAATGTGACCTTTGCCTATCCTGGTGAAACTGAAAG
TCCTGTCCTACACAACATTTCTTTCAAGGCAAAACCTGGTGAAACCATTGCCTTTATCGGATCAACGGGTTCAGGAAAAT
CATCACTTGTACAGTTGATTCCACGCTTTTATGATGTAACACTTGGACGCATTCTTGTTGATGGTGTAGATGTCCGTGAT
TACAATCTTAAGGCTCTTCGTCGTAAGATTGGCTTTATTCCACAAAAAGCTCTACTCTTTACTGGAACTATCGGTGAAAA
TATCCGTTATGGTAAGGAAAATGCCAGTCATGAAGAATTGAATCAAGCTACTGATGTGGCTCAAGCCAAGGAATTTATCG
AAAGTAAGGAAGAACGCTATGATTCTCATTTGGCTGAGGGTGGTAGCAACCTTTCTGGTGGACAGAAGCAGCGTTTGTCA
ATTGCACGTGCGGTGGTTAAACGTCCTGATCTTTATATCTTTGATGATTCCTTCTCTGCCTTGGACTACAAGACTGATGC
GACCTTGCGCCGTCGTCTAAAAGAAGTGACTCAAGATGCGACAGTCCTGATTGTAGCCCAACGTGTGGGAACTATCATGG
ATGCTGATCAAATCATTGTTTTGGATGAAGGTGAAATCGTTGGTCGTGGCCGTCATGAAGAGCTTATGGAAAGCAATGAT
ATTTACCGTGAAATTGCTAATTCACAATTGAATCAAAAGAGTCTTACGGAAGACTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(17-279)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.85

92.042

0.367