Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   V471_RS10255 Genome accession   NZ_CP015283
Coordinates   2173431..2175218 (-) Length   595 a.a.
NCBI ID   WP_060973332.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 25975     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2168431..2180218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V471_RS10225 (V471_10050) - 2168526..2169296 (-) 771 WP_049529394.1 nucleoside phosphorylase -
  V471_RS10230 (V471_10055) - 2169373..2169867 (-) 495 WP_049529395.1 DUF6773 family protein -
  V471_RS10235 (V471_10060) - 2169881..2170078 (-) 198 WP_014633454.1 helix-turn-helix transcriptional regulator -
  V471_RS10240 (V471_10065) - 2170257..2171240 (-) 984 WP_084871491.1 rhodanese-related sulfurtransferase -
  V471_RS10245 (V471_10070) - 2171437..2172138 (-) 702 WP_060971296.1 glucosamine-6-phosphate deaminase -
  V471_RS10250 (V471_10075) queA 2172290..2173333 (+) 1044 WP_084871492.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  V471_RS10255 (V471_10080) rcrQ 2173431..2175218 (-) 1788 WP_060973332.1 ABC transporter ATP-binding protein Regulator
  V471_RS10260 (V471_10085) rcrP 2175231..2176967 (-) 1737 WP_084871493.1 ABC transporter ATP-binding protein Regulator
  V471_RS11255 - 2177165..2177320 (-) 156 Protein_1967 LysR family transcriptional regulator -
  V471_RS10270 (V471_10090) - 2177330..2178883 (-) 1554 WP_064524851.1 BCCT family transporter -
  V471_RS11345 - 2179000..2179122 (-) 123 WP_002269975.1 hypothetical protein -
  V471_RS10275 (V471_10095) rplL 2179333..2179701 (-) 369 WP_084871494.1 50S ribosomal protein L7/L12 -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66516.58 Da        Isoelectric Point: 5.1445

>NTDB_id=153206 V471_RS10255 WP_060973332.1 2173431..2175218(-) (rcrQ) [Streptococcus salivarius strain ATCC 25975]
MKNNKKKTNHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVIEPVVIGLAITELTKNTLDIIKGVEGAHINVSYVGLV
LVVYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTDKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQIV
NAVFTLVLVIGTVLYLNLQLGAIVVVTIPITFFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDRSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=153206 V471_RS10255 WP_060973332.1 2173431..2175218(-) (rcrQ) [Streptococcus salivarius strain ATCC 25975]
ATGAAGAATAATAAAAAGAAAACAAACCATTCCTCAAGTTTTGGCCGTCTTTGGTCATACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCCATTTTCTTGAAAATTGTTAGTGTCATCATGAGTGTCATTGAACCCGTAGTCATTGGTTTAGCTATTA
CAGAGCTGACCAAAAATACGCTGGATATCATTAAGGGGGTAGAAGGCGCCCATATCAATGTATCCTATGTTGGTTTGGTT
CTGGTTGTTTATCTCTTGCGTGGTCTTATTTATGAGTTGGCTGCCTACTATTCCAACTATTTCATGACCAATGCTGTGCA
AGCAACGGTTCAAGATATGCGAAATGAGATGACCGATAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAGT
TTGGGGACCTCTTGGGCCGCTTTACTAGTGACGTTGAGACAGTATCTAATGCCTTGCAGCAGTCATTCTTGCAGATTGTT
AATGCCGTCTTTACTCTAGTCTTAGTTATTGGAACAGTGCTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCGTCAC
TATTCCCATTACTTTCTTTGGTGCCCGTTTTATCATGAGTAAGTCTCAACCTTACTTTAAGCAGCAGGCTGATGCTCTAG
GTACTCTTAATGGTTTTGTTCAGGAAAATCTGACTGGTTTCAATGTGCTTAAACTTTTTGGCCGTGAGGATAGATCTTTA
GACGACTTTAAAGAGATTACGGAAGACCTTCAGAAGGTAGGTTTTAAGGCCAATTTCATTTCAGGCCTCATGATGCCTGT
CCTTAATGGTTTATCTGACTTGACCTATCTCATTGTCGCTGTTCTAGGTGGTTTGCAAGTTTTGGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAATCAACCTATTCAGAACTTGACTCAGTTAGCTGGACAA
TTGCAGAGTGCTAAGTCTTCTTTGGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGCTAATGATGCTACTGAAGT
GCTTGAAGGAGATTTGACCGGTCAGGTTAGCTTTAAGCATGTAGACTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAAGTCAATCCTGGCGAAATGGTCGCTATTGTCGGCCCAACTGGTGCCGGAAAATCAACGATTATCAAT
CTTCTCATGCGTTTCTATGATGTGACGGCTGGTTCTATCTCGGTTGATGGTCATGATATTCGTAACTTATCACGTCAGGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAAAATCTTCGTTTTGGTA
ATCTTGAGGCAACTGATGAAGAAATTGTTGAAGCCGCTAAGGCTGCCAATGTGGACCACTTTATCCGTACGCTACCTGGC
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATTTCACTGGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCTAAAATCTTGATTTTGGACGAGGCAACCTCATCAGTTGATACCCGTCTGGAACTCTTGATTCAAAAGG
CTATGAAGACTCTCATGCAGGGTCGAACAAGCTTTGTCATTGCTCACCGTCTGTCAACTATCCAAGAGGCAGACAAGATT
TTGGTCCTTAAAGATGGTCAAATCATCGAACAAGGGAACCATGAATCCCTTCTTGCAGATAAAGGCTTCTATTACGATTT
GTATAATAGCCAGTTTGCAGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(29-310)

ABC transporter (ABC_tran)

(373-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.714

100

0.429