Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   V471_RS08230 Genome accession   NZ_CP015283
Coordinates   1761950..1762432 (-) Length   160 a.a.
NCBI ID   WP_002885066.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 25975     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1756950..1767432
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V471_RS08215 (V471_08100) lepB 1758864..1759421 (-) 558 WP_013990669.1 signal peptidase I -
  V471_RS08220 (V471_08105) - 1759543..1760772 (-) 1230 WP_045771776.1 tetratricopeptide repeat protein -
  V471_RS08225 (V471_08110) - 1760762..1761940 (-) 1179 WP_004182599.1 AI-2E family transporter -
  V471_RS08230 (V471_08115) mutX 1761950..1762432 (-) 483 WP_002885066.1 NUDIX hydrolase Machinery gene
  V471_RS08235 (V471_08120) ftsX 1762587..1763516 (-) 930 WP_003092823.1 permease-like cell division protein FtsX -
  V471_RS08240 (V471_08125) ftsE 1763509..1764201 (-) 693 WP_013990672.1 cell division ATP-binding protein FtsE -
  V471_RS08250 (V471_08135) queG 1765439..1766557 (-) 1119 WP_013990673.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18793.15 Da        Isoelectric Point: 4.4433

>NTDB_id=153188 V471_RS08230 WP_002885066.1 1761950..1762432(-) (mutX) [Streptococcus salivarius strain ATCC 25975]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREILEETHFTVTEMDFKGMITFPEFTPGH
DWYTYVFKVTGFEGELISDEESREGTLEWVPYDEVLSKPTWEGDYEIFKWILEDKPFFSAKFVYDRNQNLVDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=153188 V471_RS08230 WP_002885066.1 1761950..1762432(-) (mutX) [Streptococcus salivarius strain ATCC 25975]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGAAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTTGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTCTCGAGGAAACCCATTTTACAGTGACTGAGATGGATTTTAAAGGGATGATTACCTTTCCAGAATTTACCCCTGGTCAT
GATTGGTATACCTATGTCTTTAAGGTAACTGGTTTTGAAGGAGAACTCATCTCAGATGAGGAGTCTCGTGAAGGAACGCT
TGAATGGGTACCTTATGATGAGGTCTTATCTAAACCAACTTGGGAAGGTGACTATGAGATCTTCAAGTGGATTCTTGAAG
ATAAGCCTTTCTTCTCTGCAAAATTTGTCTATGATCGTAACCAAAACTTAGTAGACAAGACTGTAACCTTTTATGATAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

72.956

99.375

0.725