Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   V471_RS06460 Genome accession   NZ_CP015283
Coordinates   1382068..1382748 (+) Length   226 a.a.
NCBI ID   WP_084871284.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 25975     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1377068..1387748
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V471_RS06440 (V471_06345) - 1377122..1377955 (-) 834 WP_037601006.1 helix-turn-helix domain-containing protein -
  V471_RS06445 (V471_06350) - 1378047..1379648 (+) 1602 WP_084871283.1 ABC transporter ATP-binding protein -
  V471_RS06450 (V471_06355) - 1379770..1381038 (-) 1269 WP_045772319.1 nucleobase:cation symporter-2 family protein -
  V471_RS06455 (V471_06360) - 1381038..1381619 (-) 582 WP_004182304.1 xanthine phosphoribosyltransferase -
  V471_RS06460 (V471_06365) braR 1382068..1382748 (+) 681 WP_084871284.1 response regulator transcription factor Regulator
  V471_RS06465 (V471_06370) - 1382738..1383712 (+) 975 WP_084871285.1 sensor histidine kinase -
  V471_RS06470 (V471_06375) - 1383857..1384615 (+) 759 WP_037610458.1 ABC transporter ATP-binding protein -
  V471_RS06475 (V471_06380) - 1384617..1386617 (+) 2001 WP_084871286.1 ABC transporter permease -
  V471_RS06480 (V471_06385) - 1386702..1387196 (+) 495 WP_004182309.1 YkgJ family cysteine cluster protein -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26030.40 Da        Isoelectric Point: 4.8698

>NTDB_id=153177 V471_RS06460 WP_084871284.1 1382068..1382748(+) (braR) [Streptococcus salivarius strain ATCC 25975]
MHKILLVEDDEVIRQQVKKMLEQWGYEVVLVEDFMEVLSIFVKVEPHLVLMDIGLPLFNGYHWCQEIRKVSKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDQNVLLAKIQGLLRRSYEFGKDQSLLEYMGVILNLKAMDLVYQGEVVSLTKNEFQIL
QVLFDHAGNIVSREDLMKELWNSDFFIDDNTLSVNVALLRKKLEAVGLKDFIETKKGVGYGLRHDG

Nucleotide


Download         Length: 681 bp        

>NTDB_id=153177 V471_RS06460 WP_084871284.1 1382068..1382748(+) (braR) [Streptococcus salivarius strain ATCC 25975]
ATGCATAAGATTTTATTAGTGGAGGACGACGAGGTTATCCGTCAACAAGTCAAAAAAATGCTAGAACAGTGGGGTTACGA
AGTTGTTCTTGTTGAAGATTTCATGGAAGTATTATCTATTTTTGTAAAAGTAGAGCCCCACTTGGTTCTTATGGATATTG
GTTTACCTCTATTCAACGGTTATCATTGGTGTCAGGAAATTCGTAAGGTCTCCAAGGTGCCTATTATGTTCTTGTCTTCG
AGAGATCAGGCCATGGATATTGTTATGGCAATCAATATGGGCGGGGACGACTTTGTGACTAAACCTTTTGACCAAAATGT
TCTCCTAGCAAAAATTCAAGGGCTTTTGCGTCGTTCATATGAGTTTGGTAAGGATCAGAGTCTCTTGGAATATATGGGTG
TGATTCTGAACCTTAAGGCCATGGATTTGGTTTATCAGGGAGAGGTCGTTTCTTTGACAAAGAATGAGTTTCAGATTTTA
CAAGTTCTCTTTGATCATGCTGGTAATATCGTTAGTCGGGAAGACCTGATGAAGGAGCTTTGGAATAGTGACTTCTTTAT
TGATGACAATACCCTGTCAGTTAATGTAGCTCTTTTACGTAAGAAGTTAGAGGCAGTGGGTTTGAAGGATTTTATTGAAA
CCAAGAAAGGTGTTGGCTACGGGTTGCGTCATGATGGGTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

51.835

96.46

0.5