Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   NX99_RS04300 Genome accession   NZ_CP015282
Coordinates   1011305..1013041 (-) Length   578 a.a.
NCBI ID   WP_073689834.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 27945     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1006305..1018041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX99_RS04280 (NX99_04205) - 1006338..1007321 (-) 984 WP_002889116.1 rhodanese-related sulfurtransferase -
  NX99_RS04285 (NX99_04210) - 1007512..1008213 (-) 702 WP_084914877.1 glucosamine-6-phosphate deaminase -
  NX99_RS04290 (NX99_04215) queA 1008364..1009407 (+) 1044 WP_045769002.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  NX99_RS04295 (NX99_04220) rcrQ 1009505..1011292 (-) 1788 WP_048790608.1 ABC transporter ATP-binding protein Regulator
  NX99_RS04300 (NX99_04225) rcrP 1011305..1013041 (-) 1737 WP_073689834.1 ABC transporter ATP-binding protein Regulator
  NX99_RS04305 (NX99_04230) - 1013228..1013395 (-) 168 Protein_854 LysR family transcriptional regulator -
  NX99_RS04310 (NX99_04235) - 1013405..1014958 (-) 1554 WP_037605638.1 BCCT family transporter -
  NX99_RS10115 - 1015075..1015197 (-) 123 WP_002269975.1 hypothetical protein -
  NX99_RS04320 (NX99_04240) rplL 1015406..1015774 (-) 369 WP_004183006.1 50S ribosomal protein L7/L12 -
  NX99_RS04325 (NX99_04245) rplJ 1015850..1016353 (-) 504 WP_084914879.1 50S ribosomal protein L10 -
  NX99_RS04330 (NX99_04250) - 1016646..1017854 (-) 1209 WP_084914880.1 ABC transporter permease -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64800.67 Da        Isoelectric Point: 5.3001

>NTDB_id=153013 NX99_RS04300 WP_073689834.1 1011305..1013041(-) (rcrP) [Streptococcus salivarius strain ATCC 27945]
MAYIWSYLRRYPKWLAMNFTAAILFVIANLGLPTVLARMIDEGINRGDVDKLYAYAWVMFGVVLTGIVGRILLSYAVGKL
TTTMVQVMRNDIYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFADQVLKLGVITPLMMVSSVFLILTTSPSLAWIVA
ISLPFLAVVVWYVAVKTRPLSEKQQATLDKINQYARENLTGLRVIRAFAREDFQEKKFASENAVYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALEPLGSGTLAIGDLVAFIEYSFHALLSFLFLANLFTMYPRTAVSSERLQEIMDMPISINPNE
DGVTETETKGYLEFDNVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVQLIPRFYDVTLGRILVDGVDVRD
YNLKALRRKIGFIPQKALLFTGTIGENIRYGKENASHEELNQATDVAQAKEFIESKEERYDSHLAEGGSNLSGGQKQRLS
IARAVVKRPDLYIFDDSFSALDYKTDATLRRRLKEVTQDATVLIVAQRVGTIMDADQIIVLDEGEIVGRGRHEELMESND
IYREIANSQLNQKSLTED

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=153013 NX99_RS04300 WP_073689834.1 1011305..1013041(-) (rcrP) [Streptococcus salivarius strain ATCC 27945]
ATGGCTTATATTTGGTCTTATCTCAGACGTTATCCTAAGTGGCTAGCAATGAATTTTACGGCAGCCATTTTATTTGTTAT
TGCTAACTTGGGTTTGCCGACGGTTCTTGCCAGAATGATTGATGAGGGAATAAACCGTGGTGATGTTGATAAGCTTTACG
CTTATGCTTGGGTCATGTTTGGTGTAGTTTTGACTGGGATTGTTGGTCGTATACTTCTGTCCTATGCAGTTGGTAAGTTG
ACCACTACTATGGTGCAAGTCATGCGTAATGACATTTATGCTAAGCTTCAGGAGTATTCCCACCACGAGTATGAGCAGAT
TGGGGTATCCTCTTTGGTGACTCGTATTACATCAGATGCTTTTGTGCTTATGCAGTTTGCGGATCAGGTTCTTAAGCTAG
GGGTTATCACTCCTTTGATGATGGTTTCCAGTGTCTTTTTGATTTTGACGACAAGTCCATCTTTGGCTTGGATTGTGGCA
ATCTCCTTGCCTTTCCTAGCCGTAGTAGTCTGGTATGTGGCGGTAAAAACGCGTCCGCTTTCTGAAAAGCAACAGGCAAC
TCTCGACAAGATTAACCAGTATGCTCGTGAAAATCTGACTGGACTTCGTGTCATCCGAGCTTTCGCTAGAGAAGATTTTC
AAGAGAAGAAGTTTGCTTCTGAAAATGCTGTCTATGCGGATAATTCAAACAAGCTCTTTAAATTAACTGGTTTGACTGAG
CCACTTTTTGTGCAAATCATCATCGCCATGATTGTGGCAATTGTTTGGTTTGCCCTTGAGCCATTAGGTTCTGGGACGTT
GGCAATCGGTGACTTGGTTGCCTTTATTGAGTACAGCTTCCATGCACTATTGTCTTTCCTTTTCCTAGCCAATCTCTTTA
CCATGTATCCTCGTACGGCGGTGTCTAGTGAACGTCTGCAGGAAATTATGGACATGCCGATTTCTATCAATCCAAATGAA
GATGGCGTGACAGAAACCGAGACTAAGGGATATTTGGAGTTTGACAATGTGACCTTTGCCTATCCTGGTGAAACTGAAAG
TCCTGTCCTACACAACATTTCTTTCAAGGCAAAACCTGGTGAAACCATTGCCTTTATCGGATCAACGGGTTCAGGAAAAT
CCTCTCTTGTACAGTTGATTCCACGCTTTTATGATGTAACACTTGGACGCATTCTTGTTGATGGTGTGGATGTCCGTGAC
TACAATCTTAAGGCTCTTCGTCGTAAGATTGGCTTTATTCCACAAAAAGCCCTACTCTTTACAGGGACTATTGGTGAAAA
TATCCGTTATGGTAAGGAAAATGCCAGTCATGAAGAATTGAATCAAGCTACTGATGTGGCTCAAGCCAAGGAATTTATCG
AAAGTAAGGAAGAACGCTATGATTCTCACTTGGCTGAGGGTGGTAGCAACCTTTCTGGTGGACAGAAGCAGCGTTTGTCA
ATTGCACGTGCGGTGGTTAAACGTCCTGATCTTTATATCTTTGATGATTCCTTCTCTGCCTTGGACTACAAGACTGATGC
GACCTTGCGCCGTCGTCTAAAAGAAGTGACTCAAGATGCGACAGTCCTGATTGTTGCCCAACGTGTGGGAACTATCATGG
ATGCTGATCAAATCATTGTTTTGGATGAAGGTGAAATCGTCGGTCGTGGCCGTCATGAAGAGCTTATGGAAAGCAATGAC
ATTTACCGTGAAATTGCTAATTCACAATTGAATCAAAAGAGTCTTACGGAAGACTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(17-279)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.85

92.042

0.367