Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   NX99_RS04295 Genome accession   NZ_CP015282
Coordinates   1009505..1011292 (-) Length   595 a.a.
NCBI ID   WP_048790608.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 27945     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1004505..1016292
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX99_RS04265 (NX99_04190) - 1004605..1005375 (-) 771 WP_084914875.1 nucleoside phosphorylase -
  NX99_RS04270 (NX99_04195) - 1005454..1005948 (-) 495 WP_002885975.1 DUF6773 family protein -
  NX99_RS04275 (NX99_04200) - 1005962..1006159 (-) 198 WP_002885991.1 helix-turn-helix transcriptional regulator -
  NX99_RS04280 (NX99_04205) - 1006338..1007321 (-) 984 WP_002889116.1 rhodanese-related sulfurtransferase -
  NX99_RS04285 (NX99_04210) - 1007512..1008213 (-) 702 WP_084914877.1 glucosamine-6-phosphate deaminase -
  NX99_RS04290 (NX99_04215) queA 1008364..1009407 (+) 1044 WP_045769002.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  NX99_RS04295 (NX99_04220) rcrQ 1009505..1011292 (-) 1788 WP_048790608.1 ABC transporter ATP-binding protein Regulator
  NX99_RS04300 (NX99_04225) rcrP 1011305..1013041 (-) 1737 WP_073689834.1 ABC transporter ATP-binding protein Regulator
  NX99_RS04305 (NX99_04230) - 1013228..1013395 (-) 168 Protein_854 LysR family transcriptional regulator -
  NX99_RS04310 (NX99_04235) - 1013405..1014958 (-) 1554 WP_037605638.1 BCCT family transporter -
  NX99_RS10115 - 1015075..1015197 (-) 123 WP_002269975.1 hypothetical protein -
  NX99_RS04320 (NX99_04240) rplL 1015406..1015774 (-) 369 WP_004183006.1 50S ribosomal protein L7/L12 -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66534.55 Da        Isoelectric Point: 5.1445

>NTDB_id=153012 NX99_RS04295 WP_048790608.1 1009505..1011292(-) (rcrQ) [Streptococcus salivarius strain ATCC 27945]
MKNNKKKTNHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVIEPVVIGLAITELTKNTLDIIKGVEGAHINVSYVGLV
LVVYLLRGLIYELAAYYSNYFMTNAVQATVQDMRNEMTDKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQIV
NAVFTLVLVIGTVLYLNLQLGAVVVVTIPITYFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDRSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLEGDLTGQVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTSGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=153012 NX99_RS04295 WP_048790608.1 1009505..1011292(-) (rcrQ) [Streptococcus salivarius strain ATCC 27945]
ATGAAGAATAATAAAAAGAAAACAAATCATTCCTCAAGTTTTGGCCGTCTTTGGTCATACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCCATTTTCTTGAAAATTGTTAGTGTCATCATGAGTGTCATTGAACCCGTAGTCATTGGTTTAGCTATTA
CAGAGCTGACCAAAAATACGCTGGATATCATTAAGGGGGTAGAAGGCGCCCATATCAATGTATCCTATGTTGGTTTGGTT
CTGGTTGTTTATCTCTTGCGTGGTCTTATTTATGAGTTGGCTGCCTACTATTCCAACTATTTCATGACTAATGCTGTGCA
AGCAACGGTTCAAGATATGCGAAATGAGATGACCGATAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAAT
TTGGGGACCTCTTGGGCCGCTTTACTAGTGACGTTGAGACAGTATCTAATGCCTTGCAGCAATCATTCTTGCAGATTGTT
AATGCCGTCTTTACTCTAGTCTTAGTTATTGGAACAGTGCTTTACCTTAATCTTCAATTGGGAGCTGTGGTTGTCGTCAC
TATTCCGATTACTTACTTTGGCGCTCGCTTCATTATGAGTAAGTCTCAACCTTACTTTAAGCAGCAGGCTGATGCCCTAG
GTACTCTTAACGGTTTTGTTCAGGAAAATCTGACTGGCTTCAATGTACTTAAGCTTTTTGGGCGTGAGGATAGATCCTTG
GACGATTTTAAAGAAATCACGGAAGACCTTCAGAAGGTAGGCTTTAAGGCTAATTTCATTTCAGGACTTATGATGCCAGT
TCTTAACGGTTTATCTGACTTGACTTATCTAATTGTCGCTGTTTTGGGTGGTCTGCAAGTTTTGGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAACCAACCTATTCAGAACTTGACTCAGTTGGCTGGACAA
TTGCAAAGTGCTAAATCTTCTTTGGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGCTAATGATGCTACTGAAGT
GCTAGAGGGAGACTTGACTGGTCAAGTTAGCTTTAAGCATGTGGACTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAATCCTGGCGAAATGGTAGCCATTGTCGGCCCTACCGGTGCCGGAAAATCAACCATTATCAAC
CTCCTCATGCGCTTCTATGATGTGACTTCCGGTTCTATCTCGGTTGATGGTCACGATATCCGTAACCTGTCACGTCAGGA
TTATCGTAAACAGTTTGGTATGGTGCTTCAGGATGCTTGGCTCTTTGAAGGAACTATCAAGGAGAATCTTCGCTTTGGTA
ATCTTGAGGCAACTGACGAAGAAATTGTTGAAGCTGCTAAGGCAGCCAATGTGGATCACTTTATCCGTACCCTACCTGGT
GGTTACAACATGGAAATGAACCAGGAATCAAGTAACATCTCACTAGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCTAAAATCTTGATTTTGGATGAGGCGACCTCATCGGTTGATACCCGTCTGGAACTCTTGATTCAAAAAG
CCATGAAGACTCTTATGCAAGGTCGAACAAGCTTTGTCATCGCTCACCGCTTATCAACGATTCAAGAAGCAGACAAGATT
TTGGTCCTAAAAGATGGTCAAATCATCGAACAAGGAAACCATGAATCCCTCCTTGCAGATAAAGGCTTCTATTACGATTT
ATATAATAGCCAGTTTGCAGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(373-521)

ABC transporter transmembrane region (ABC_membrane)

(29-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.546

100

0.427