Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI11_RS04905 | Genome accession | NZ_CP012250 |
| Coordinates | 939439..939741 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CJ516CC45 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 934439..944741
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI11_RS04880 (AEI11_04915) | rpsR | 934802..935062 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI11_RS04885 (AEI11_04920) | lon | 935122..937497 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| AEI11_RS04890 (AEI11_04925) | bamD | 937514..938161 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| AEI11_RS04895 (AEI11_04930) | fliW | 938322..938711 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI11_RS04900 (AEI11_04935) | proC | 938711..939442 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI11_RS04905 (AEI11_04940) | ctsT | 939439..939741 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| AEI11_RS04910 (AEI11_04945) | - | 939738..940400 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| AEI11_RS04915 (AEI11_04950) | - | 940397..940849 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| AEI11_RS04920 (AEI11_04955) | hemD | 940846..941475 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| AEI11_RS04925 (AEI11_04960) | thiE | 941453..942085 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| AEI11_RS04930 (AEI11_04965) | thiD | 942075..942887 (-) | 813 | WP_002871792.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI11_RS04935 (AEI11_04970) | - | 942884..943570 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| AEI11_RS04940 (AEI11_04975) | - | 943567..944328 (-) | 762 | WP_002871793.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=152993 AEI11_RS04905 WP_002853046.1 939439..939741(+) (ctsT) [Campylobacter jejuni strain CJ516CC45]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152993 AEI11_RS04905 WP_002853046.1 939439..939741(+) (ctsT) [Campylobacter jejuni strain CJ516CC45]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |