Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | AEI09_RS05650 | Genome accession | NZ_CP012248 |
| Coordinates | 1068632..1069582 (+) | Length | 316 a.a. |
| NCBI ID | WP_002866164.1 | Uniprot ID | Q9ALT6 |
| Organism | Campylobacter jejuni strain CJ514CC45 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1047280..1084502 | 1068632..1069582 | within | 0 |
Gene organization within MGE regions
Location: 1047280..1084502
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI09_RS05530 (AEI09_05560) | pglI | 1047280..1048209 (-) | 930 | WP_002866141.1 | GalNAc(5)-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase | - |
| AEI09_RS05535 (AEI09_05565) | pglH | 1048202..1049281 (-) | 1080 | WP_072238645.1 | GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)- diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase | - |
| AEI09_RS05540 (AEI09_05570) | pglK | 1049278..1050972 (-) | 1695 | WP_002877063.1 | ABC-type lipopolysaccharide transporter PglK | - |
| AEI09_RS05545 (AEI09_05575) | galE | 1050966..1051952 (-) | 987 | WP_002877060.1 | UDP-glucose 4-epimerase GalE | - |
| AEI09_RS05550 (AEI09_05580) | - | 1052011..1052805 (-) | 795 | WP_002877059.1 | 3'-5' exonuclease | - |
| AEI09_RS05555 (AEI09_05585) | waaC | 1052871..1053899 (+) | 1029 | WP_002866145.1 | lipopolysaccharide heptosyltransferase I | - |
| AEI09_RS05560 (AEI09_05590) | htrB | 1053889..1054767 (+) | 879 | WP_052805983.1 | lipid A biosynthesis lauroyl acyltransferase HtrB | - |
| AEI09_RS05565 (AEI09_05595) | - | 1054764..1055465 (+) | 702 | WP_052805984.1 | glycosyltransferase family 2 protein | - |
| AEI09_RS05570 (AEI09_05600) | rfbA | 1055476..1056354 (+) | 879 | WP_002869595.1 | glucose-1-phosphate thymidylyltransferase RfbA | - |
| AEI09_RS05575 (AEI09_05605) | rfbB | 1056354..1057385 (+) | 1032 | WP_002860226.1 | dTDP-glucose 4,6-dehydratase | - |
| AEI09_RS05580 (AEI09_05610) | wlaRA | 1057388..1057825 (+) | 438 | WP_002891875.1 | class E lipooligosaccharide biosynthesis 3,4-ketoisomerase WlaRA | - |
| AEI09_RS05585 (AEI09_05615) | wlaRB | 1057833..1058237 (+) | 405 | WP_002860228.1 | class E lipooligosaccharide biosynthesis 3,4-ketoisomerase WlaRB | - |
| AEI09_RS05590 (AEI09_05620) | - | 1058227..1058670 (+) | 444 | WP_020247173.1 | N-acetyltransferase | - |
| AEI09_RS05595 (AEI09_05625) | - | 1058692..1059219 (+) | 528 | WP_002869598.1 | GNAT family N-acetyltransferase | - |
| AEI09_RS08765 | - | 1059240..1059497 (+) | 258 | Protein_1096 | hypothetical protein | - |
| AEI09_RS05600 (AEI09_05630) | - | 1059516..1060580 (+) | 1065 | WP_002869599.1 | glycosyltransferase family 2 protein | - |
| AEI09_RS05605 (AEI09_05635) | - | 1060593..1061645 (+) | 1053 | WP_002869601.1 | glycosyltransferase family 2 protein | - |
| AEI09_RS05610 (AEI09_05640) | wlaRG | 1061611..1062696 (+) | 1086 | WP_025998025.1 | class E lipooligosaccharide biosynthesis aminotransferase WlaRG | - |
| AEI09_RS05615 (AEI09_05645) | - | 1062723..1063982 (-) | 1260 | WP_022552326.1 | DUF2972 domain-containing protein | - |
| AEI09_RS08710 (AEI09_05650) | - | 1063979..1065003 (-) | 1025 | Protein_1101 | hypothetical protein | - |
| AEI09_RS05630 (AEI09_05655) | - | 1065074..1065847 (+) | 774 | WP_002866160.1 | glycosyltransferase family 25 protein | - |
| AEI09_RS05635 (AEI09_05660) | wlaTB | 1065840..1066796 (+) | 957 | WP_002891855.1 | class E lipooligosaccharide biosynthesis protein WlaTB | - |
| AEI09_RS05640 (AEI09_05665) | wlaTC | 1066793..1067752 (+) | 960 | WP_002891853.1 | class E lipooligosaccharide biosynthesis protein WlaTC | - |
| AEI09_RS05645 (AEI09_05670) | waaV | 1067755..1068573 (-) | 819 | WP_002877115.1 | glycosyltransferase family 2 protein | - |
| AEI09_RS05650 (AEI09_05675) | waaF | 1068632..1069582 (+) | 951 | WP_002866164.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| AEI09_RS05655 (AEI09_05680) | - | 1069634..1071133 (+) | 1500 | WP_002877116.1 | MBOAT family O-acyltransferase | - |
| AEI09_RS05660 (AEI09_05685) | - | 1071281..1072258 (+) | 978 | WP_002866168.1 | hypothetical protein | - |
| AEI09_RS05665 (AEI09_05690) | gmhA | 1072262..1072822 (-) | 561 | WP_002877119.1 | D-sedoheptulose 7-phosphate isomerase | - |
| AEI09_RS05670 (AEI09_05695) | rfaE1 | 1072819..1074204 (-) | 1386 | WP_022552328.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| AEI09_RS05675 (AEI09_05700) | rfaD | 1074197..1075150 (-) | 954 | WP_022552329.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| AEI09_RS05680 (AEI09_05705) | gmhB | 1075151..1075711 (-) | 561 | WP_002877124.1 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| AEI09_RS05685 (AEI09_05710) | - | 1075793..1076095 (+) | 303 | WP_022552330.1 | c-type cytochrome | - |
| AEI09_RS05690 (AEI09_05715) | ccoS | 1076118..1076324 (-) | 207 | WP_002877126.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
| AEI09_RS05695 (AEI09_05720) | - | 1076321..1078678 (-) | 2358 | WP_072238644.1 | heavy metal translocating P-type ATPase | - |
| AEI09_RS05700 (AEI09_05725) | rho | 1078788..1080086 (+) | 1299 | WP_002853705.1 | transcription termination factor Rho | - |
| AEI09_RS05705 (AEI09_05730) | dnaX | 1080090..1081619 (+) | 1530 | WP_002866174.1 | DNA polymerase III subunit gamma/tau | - |
| AEI09_RS05710 (AEI09_05735) | - | 1081616..1082137 (-) | 522 | WP_002853472.1 | DUF2165 family protein | - |
| AEI09_RS05715 (AEI09_05740) | copA | 1082209..1084308 (-) | 2100 | WP_002866176.1 | copper-translocating P-type ATPase CopA | - |
| AEI09_RS05720 (AEI09_05745) | - | 1084308..1084502 (-) | 195 | WP_002870481.1 | heavy-metal-associated domain-containing protein | - |
Sequence
Protein
Download Length: 316 a.a. Molecular weight: 36378.95 Da Isoelectric Point: 10.3102
>NTDB_id=152969 AEI09_RS05650 WP_002866164.1 1068632..1069582(+) (waaF) [Campylobacter jejuni strain CJ514CC45]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNTQFILYGSLVSTALFREFPNSKIIIENKQTRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISTVYKIKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEEIKKLSTP
MKIFIHLPTWLGDAVMASPALYAIKEHFKNTQFILYGSLVSTALFREFPNSKIIIENKQTRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISTVYKIKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEEIKKLSTP
Nucleotide
Download Length: 951 bp
>NTDB_id=152969 AEI09_RS05650 WP_002866164.1 1068632..1069582(+) (waaF) [Campylobacter jejuni strain CJ514CC45]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATACCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAGGGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAAACCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTACGGTTTATAAGATAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGTCCTTTAAAGC
ACCATAAATGCATGAAAGATCTAAAGCCTGAAAAGGTGATAGAAGAAATTAAAAAATTAAGCACTCCATAA
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATACCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAGGGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAAACCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTACGGTTTATAAGATAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGTCCTTTAAAGC
ACCATAAATGCATGAAAGATCTAAAGCCTGAAAAGGTGATAGAAGAAATTAAAAAATTAAGCACTCCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
94.249 |
99.051 |
0.934 |