Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   AEI04_RS03030 Genome accession   NZ_CP012244
Coordinates   566177..566614 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain CJ509CC45     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 561177..571614
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI04_RS03010 (AEI04_03015) kdpD 561665..563596 (+) 1932 WP_002877682.1 sensor histidine kinase -
  AEI04_RS03015 (AEI04_03020) uvrB 563591..565564 (-) 1974 WP_002898591.1 excinuclease ABC subunit UvrB -
  AEI04_RS03020 (AEI04_03025) - 565718..565948 (+) 231 WP_002852327.1 hypothetical protein -
  AEI04_RS03025 (AEI04_03030) - 565938..566180 (+) 243 WP_002854947.1 hypothetical protein -
  AEI04_RS03030 (AEI04_03035) Cj0683 566177..566614 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI04_RS03035 (AEI04_03040) priA 566596..568449 (+) 1854 WP_002866530.1 primosomal protein N' -
  AEI04_RS03040 (AEI04_03045) cipA 568459..569852 (-) 1394 Protein_596 DUF2972 domain-containing protein -
  AEI04_RS03045 (AEI04_03050) - 569863..570387 (-) 525 WP_002876965.1 adenylyl-sulfate kinase -
  AEI04_RS03050 (AEI04_03055) ispG 570510..571583 (+) 1074 WP_002854766.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=152936 AEI04_RS03030 WP_002852324.1 566177..566614(+) (Cj0683) [Campylobacter jejuni strain CJ509CC45]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=152936 AEI04_RS03030 WP_002852324.1 566177..566614(+) (Cj0683) [Campylobacter jejuni strain CJ509CC45]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGTTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCACAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAATGCTAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AATGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1

Multiple sequence alignment