Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   AEI07_RS07120 Genome accession   NZ_CP012243
Coordinates   1353210..1354394 (-) Length   394 a.a.
NCBI ID   WP_052777906.1    Uniprot ID   A0A5Y9FWL1
Organism   Campylobacter jejuni strain CJ512CC45     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1348210..1359394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI07_RS07095 (AEI07_07100) fliL 1349359..1349895 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  AEI07_RS07100 (AEI07_07105) acpS 1349895..1350242 (+) 348 WP_002825806.1 holo-ACP synthase -
  AEI07_RS07105 (AEI07_07110) - 1350243..1350662 (-) 420 WP_002862076.1 hypothetical protein -
  AEI07_RS07110 (AEI07_07115) - 1350659..1352020 (-) 1362 WP_002887974.1 cytochrome P450 -
  AEI07_RS07115 (AEI07_07120) - 1352017..1353138 (-) 1122 WP_052777905.1 hypothetical protein -
  AEI07_RS07120 (AEI07_07125) kpsS 1353210..1354394 (-) 1185 WP_052777906.1 capsule polysaccharide modification protein KpsS Regulator
  AEI07_RS07125 (AEI07_07130) kpsC 1354391..1356454 (-) 2064 WP_260629732.1 capsular polysaccharide biosynthesis protein -
  AEI07_RS07130 (AEI07_07135) - 1356521..1357234 (-) 714 WP_251827014.1 sugar transferase -
  AEI07_RS07135 - 1357309..1357770 (-) 462 WP_052777908.1 hypothetical protein -
  AEI07_RS07140 (AEI07_07140) - 1358099..1358266 (-) 168 WP_215426019.1 hypothetical protein -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46828.49 Da        Isoelectric Point: 9.8674

>NTDB_id=152921 AEI07_RS07120 WP_052777906.1 1353210..1354394(-) (kpsS) [Campylobacter jejuni strain CJ512CC45]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAMKMKKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTQESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=152921 AEI07_RS07120 WP_052777906.1 1353210..1354394(-) (kpsS) [Campylobacter jejuni strain CJ512CC45]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAATGAAAATGAAAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACAAGGTGTAAATGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCCAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATATAGAAAATATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAAGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCTATGGATAGGGGTTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGTCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTGTGTAATTTTAAGA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5Y9FWL1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.223

100

0.982


Multiple sequence alignment