Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   AEI25_RS06695 Genome accession   NZ_CP012242
Coordinates   1281206..1282390 (-) Length   394 a.a.
NCBI ID   WP_178890660.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ055CCUA     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1276206..1287390
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI25_RS06670 (AEI25_06665) fliL 1277366..1277902 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  AEI25_RS06675 (AEI25_06670) acpS 1277902..1278249 (+) 348 WP_260627890.1 holo-ACP synthase -
  AEI25_RS06680 (AEI25_06675) - 1278250..1278657 (-) 408 WP_260627891.1 hypothetical protein -
  AEI25_RS06685 (AEI25_06680) - 1278654..1280015 (-) 1362 WP_260627892.1 cytochrome P450 -
  AEI25_RS06690 (AEI25_06685) - 1280012..1281133 (-) 1122 WP_260627893.1 DUF829 domain-containing protein -
  AEI25_RS06695 (AEI25_06690) kpsS 1281206..1282390 (-) 1185 WP_178890660.1 capsule polysaccharide modification protein KpsS Regulator
  AEI25_RS06700 (AEI25_06695) kpsC 1282387..1284456 (-) 2070 WP_260627894.1 capsular polysaccharide biosynthesis protein -
  AEI25_RS06705 (AEI25_06700) - 1284534..1285787 (-) 1254 WP_260627895.1 cation:proton antiporter -
  AEI25_RS06710 (AEI25_06705) - 1285797..1286762 (-) 966 WP_260627896.1 pyruvate kinase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46794.51 Da        Isoelectric Point: 9.9031

>NTDB_id=152897 AEI25_RS06695 WP_178890660.1 1281206..1282390(-) (kpsS) [Campylobacter jejuni strain CJ055CCUA]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAMKMKKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPLFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=152897 AEI25_RS06695 WP_178890660.1 1281206..1282390(-) (kpsS) [Campylobacter jejuni strain CJ055CCUA]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAATGAAAATGAAAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTAGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTGTTTAACAACAAACTTCATCATCGTAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGTGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAATCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGTTATAAGAATTATTCTAAACTCATAAACGATTTAAGTCAAAAATATCATGTAG
AGGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTGTGTAATTTTAAGA
AATATCTTTTACAAACTAACCAATTCAACGGTAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.223

100

0.982


Multiple sequence alignment