Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AEI25_RS06410 Genome accession   NZ_CP012242
Coordinates   1221410..1222378 (+) Length   322 a.a.
NCBI ID   WP_260627875.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ055CCUA     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1216410..1227378
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI25_RS06385 (AEI25_06380) cdsA 1217320..1218045 (-) 726 WP_260627870.1 phosphatidate cytidylyltransferase -
  AEI25_RS06390 (AEI25_06385) - 1218054..1218392 (-) 339 WP_260627871.1 hypothetical protein -
  AEI25_RS06395 (AEI25_06390) - 1218394..1219701 (-) 1308 WP_260627872.1 NFACT family protein -
  AEI25_RS06400 (AEI25_06395) mobA 1219763..1220338 (+) 576 WP_260627873.1 molybdenum cofactor guanylyltransferase -
  AEI25_RS06405 (AEI25_06400) pldA 1220335..1221324 (+) 990 WP_260627874.1 phospholipase A -
  AEI25_RS06410 (AEI25_06405) ceuB 1221410..1222378 (+) 969 WP_260627875.1 ABC transporter permease Machinery gene
  AEI25_RS06415 (AEI25_06410) ceuC 1222371..1223309 (+) 939 WP_260627876.1 iron chelate uptake ABC transporter family permease subunit -
  AEI25_RS06420 (AEI25_06415) ceuD 1223306..1224061 (+) 756 WP_134227015.1 ABC transporter ATP-binding protein -
  AEI25_RS06425 (AEI25_06420) ceuB 1224074..1225066 (+) 993 WP_260627877.1 enterochelin ABC transporter substrate-binding protein CeuB -
  AEI25_RS06435 (AEI25_06430) - 1225292..1225846 (-) 555 WP_002934378.1 hypothetical protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35454.39 Da        Isoelectric Point: 9.6784

>NTDB_id=152895 AEI25_RS06410 WP_260627875.1 1221410..1222378(+) (ceuB) [Campylobacter jejuni strain CJ055CCUA]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFSGASFFTQAVIASVFALLGSFIFIQILRKIKLRDVIFVPLIGLMFGGIISAITTFFA
YALNYIQIIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=152895 AEI25_RS06410 WP_260627875.1 1221410..1222378(+) (ceuB) [Campylobacter jejuni strain CJ055CCUA]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTTACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGGACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTTCTGGAGCATC
TTTTTTCACTCAAGCTGTCATTGCTTCTGTATTTGCGCTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAGAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAATTATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCGCTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGATTAATTATCCCGAATTTAGTAGCTCTTTATCTAGGCGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGCGGGGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

98.447

100

0.984

Multiple sequence alignment