Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   AEI25_RS02630 Genome accession   NZ_CP012242
Coordinates   503696..504133 (+) Length   145 a.a.
NCBI ID   WP_260628297.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ055CCUA     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 498696..509133
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI25_RS02610 (AEI25_02635) kdpD 499184..501115 (+) 1932 WP_002932500.1 sensor histidine kinase -
  AEI25_RS02615 (AEI25_02640) uvrB 501110..503083 (-) 1974 WP_002932502.1 excinuclease ABC subunit UvrB -
  AEI25_RS02620 (AEI25_02645) - 503237..503467 (+) 231 WP_002852327.1 hypothetical protein -
  AEI25_RS02625 (AEI25_02650) - 503457..503699 (+) 243 WP_002854947.1 hypothetical protein -
  AEI25_RS02630 (AEI25_02655) Cj0683 503696..504133 (+) 438 WP_260628297.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI25_RS02635 (AEI25_02660) priA 504115..505968 (+) 1854 WP_260628298.1 primosomal protein N' -
  AEI25_RS02640 (AEI25_02665) - 505961..506719 (-) 759 WP_260628299.1 CTP:phosphoglutamine cytidylyltransferase -
  AEI25_RS02645 (AEI25_02670) - 506721..507323 (-) 603 WP_002931920.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16793.81 Da        Isoelectric Point: 8.0993

>NTDB_id=152885 AEI25_RS02630 WP_260628297.1 503696..504133(+) (Cj0683) [Campylobacter jejuni strain CJ055CCUA]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNVQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=152885 AEI25_RS02630 WP_260628297.1 503696..504133(+) (Cj0683) [Campylobacter jejuni strain CJ055CCUA]
ATGAATAAAGCTTTTACTTTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGTGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

99.31

100

0.993

Multiple sequence alignment