Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   AEI14_RS07045 Genome accession   NZ_CP012241
Coordinates   1340220..1341404 (-) Length   394 a.a.
NCBI ID   WP_002875236.1    Uniprot ID   A0A5T0M325
Organism   Campylobacter jejuni strain CJ065CC48     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1335220..1346404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI14_RS07020 (AEI14_07050) fliL 1336368..1336904 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  AEI14_RS07025 (AEI14_07055) acpS 1336904..1337251 (+) 348 WP_002825806.1 holo-ACP synthase -
  AEI14_RS07030 (AEI14_07060) - 1337252..1337671 (-) 420 WP_002855518.1 hypothetical protein -
  AEI14_RS07035 (AEI14_07065) - 1337668..1339029 (-) 1362 WP_002855307.1 cytochrome P450 -
  AEI14_RS07040 (AEI14_07070) - 1339026..1340147 (-) 1122 WP_002894818.1 hypothetical protein -
  AEI14_RS07045 (AEI14_07075) kpsS 1340220..1341404 (-) 1185 WP_002875236.1 capsule polysaccharide modification protein KpsS Regulator
  AEI14_RS07050 (AEI14_07080) kpsC 1341401..1343470 (-) 2070 WP_002894815.1 capsular polysaccharide biosynthesis protein -
  AEI14_RS07055 (AEI14_07085) cysC 1343467..1343979 (-) 513 WP_002894813.1 cytidine diphosphoramidate kinase -
  AEI14_RS07060 (AEI14_07090) - 1343969..1344730 (-) 762 WP_002872736.1 CTP:phosphoglutamine cytidylyltransferase -
  AEI14_RS07065 (AEI14_07095) - 1344732..1345334 (-) 603 WP_002872737.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46865.54 Da        Isoelectric Point: 9.9073

>NTDB_id=152871 AEI14_RS07045 WP_002875236.1 1340220..1341404(-) (kpsS) [Campylobacter jejuni strain CJ065CC48]
MRFSTKIKKEFSGKNILLLQGPVGNFFHHLAVKMRKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=152871 AEI14_RS07045 WP_002875236.1 1340220..1341404(-) (kpsS) [Campylobacter jejuni strain CJ065CC48]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATATTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAGTGAAAATGAGAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGCGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTAGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5T0M325

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.985

100

0.99


Multiple sequence alignment