Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   AEI14_RS03465 Genome accession   NZ_CP012241
Coordinates   632453..632890 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain CJ065CC48     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 627453..637890
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI14_RS03440 - 627946..629097 (+) 1152 WP_237961707.1 sensor histidine kinase KdpD -
  AEI14_RS03445 - 629121..629765 (+) 645 WP_223209779.1 DUF4118 domain-containing protein -
  AEI14_RS03450 (AEI14_03475) uvrB 629867..631840 (-) 1974 WP_002872078.1 excinuclease ABC subunit UvrB -
  AEI14_RS03455 (AEI14_03480) - 631994..632224 (+) 231 WP_002852327.1 hypothetical protein -
  AEI14_RS03460 (AEI14_03485) - 632214..632456 (+) 243 WP_002854947.1 hypothetical protein -
  AEI14_RS03465 (AEI14_03490) Cj0683 632453..632890 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI14_RS03470 (AEI14_03495) priA 632872..634725 (+) 1854 WP_002872079.1 primosomal protein N' -
  AEI14_RS03475 (AEI14_03500) cipA 634735..636129 (-) 1395 WP_002896028.1 DUF2972 domain-containing protein -
  AEI14_RS03480 (AEI14_03505) ispG 636275..637348 (+) 1074 WP_002854766.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=152859 AEI14_RS03465 WP_002852324.1 632453..632890(+) (Cj0683) [Campylobacter jejuni strain CJ065CC48]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=152859 AEI14_RS03465 WP_002852324.1 632453..632890(+) (Cj0683) [Campylobacter jejuni strain CJ065CC48]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCACAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1

Multiple sequence alignment