Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   AEI00_RS06640 Genome accession   NZ_CP012239
Coordinates   1289065..1290249 (-) Length   394 a.a.
NCBI ID   WP_052861662.1    Uniprot ID   A0A5T0CVB1
Organism   Campylobacter jejuni strain CJ029CC45     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1284065..1295249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI00_RS06615 (AEI00_06655) fliL 1285214..1285750 (+) 537 WP_002877383.1 flagellar basal body-associated protein FliL -
  AEI00_RS06620 (AEI00_06660) acpS 1285751..1286098 (+) 348 WP_002825806.1 holo-ACP synthase -
  AEI00_RS06625 (AEI00_06665) - 1286099..1286518 (-) 420 WP_002862076.1 hypothetical protein -
  AEI00_RS06630 (AEI00_06670) - 1286515..1287876 (-) 1362 WP_002890764.1 cytochrome P450 -
  AEI00_RS06635 (AEI00_06675) - 1287873..1288994 (-) 1122 WP_052861660.1 hypothetical protein -
  AEI00_RS06640 (AEI00_06680) kpsS 1289065..1290249 (-) 1185 WP_052861662.1 capsule polysaccharide modification protein KpsS Regulator
  AEI00_RS06645 (AEI00_06685) - 1290246..1291349 (-) 1104 Protein_1298 capsular polysaccharide biosynthesis protein -
  AEI00_RS06650 (AEI00_06690) - 1291414..1291665 (-) 252 Protein_1299 sugar transferase -
  AEI00_RS06655 - 1291656..1293044 (-) 1389 WP_260628583.1 glycosyltransferase family 8 protein -
  AEI00_RS06660 - 1293048..1295156 (-) 2109 WP_052861664.1 glycosyltransferase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46842.56 Da        Isoelectric Point: 9.9031

>NTDB_id=152843 AEI00_RS06640 WP_052861662.1 1289065..1290249(-) (kpsS) [Campylobacter jejuni strain CJ029CC45]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAMKMKKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPILVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=152843 AEI00_RS06640 WP_052861662.1 1289065..1290249(-) (kpsS) [Campylobacter jejuni strain CJ029CC45]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAATGAAAATGAAAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGTAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTGC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCCTTTTTGTATTGGTTATTTGCTTTTATTTTGGCCCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATATAGAAAATATCTTTACAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGTTATAAGAATTATTCTAAACTCATAAACGATTTAAGTCAAAAATATCATGTAG
AGGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACCATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTATTTTGGTATGTAATTTTAAGA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTACAAAAATTTCTTTTTAGATAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5T0CVB1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.223

100

0.982


Multiple sequence alignment