Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   AEI00_RS06345 Genome accession   NZ_CP012239
Coordinates   1228487..1229455 (+) Length   322 a.a.
NCBI ID   WP_022552384.1    Uniprot ID   A0A5T0GNF1
Organism   Campylobacter jejuni strain CJ029CC45     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1223487..1234455
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI00_RS06320 (AEI00_06365) cdsA 1224397..1225122 (-) 726 WP_052861644.1 phosphatidate cytidylyltransferase -
  AEI00_RS06325 (AEI00_06370) - 1225131..1225469 (-) 339 WP_022552380.1 hypothetical protein -
  AEI00_RS06330 (AEI00_06375) - 1225471..1226778 (-) 1308 WP_022552381.1 NFACT RNA binding domain-containing protein -
  AEI00_RS06335 (AEI00_06380) mobA 1226840..1227415 (+) 576 WP_022552382.1 molybdenum cofactor guanylyltransferase -
  AEI00_RS06340 (AEI00_06385) pldA 1227412..1228401 (+) 990 WP_022552383.1 phospholipase A -
  AEI00_RS06345 (AEI00_06390) ceuB 1228487..1229455 (+) 969 WP_022552384.1 ABC transporter permease Machinery gene
  AEI00_RS06350 (AEI00_06395) ceuC 1229448..1230386 (+) 939 WP_002866771.1 iron chelate uptake ABC transporter family permease subunit -
  AEI00_RS06355 (AEI00_06400) ceuD 1230383..1231138 (+) 756 WP_260628577.1 ABC transporter ATP-binding protein -
  AEI00_RS06360 (AEI00_06405) ceuB 1231151..1232143 (+) 993 WP_002866773.1 enterochelin ABC transporter substrate-binding protein CeuB -
  AEI00_RS06365 (AEI00_06410) - 1232299..1232520 (+) 222 WP_002853781.1 hypothetical protein -
  AEI00_RS06370 (AEI00_06415) - 1232521..1232802 (+) 282 WP_002866775.1 type II toxin-antitoxin system RelE/ParE family toxin -
  AEI00_RS06380 (AEI00_06425) - 1233164..1233718 (-) 555 WP_002855904.1 membrane protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35425.35 Da        Isoelectric Point: 9.6678

>NTDB_id=152841 AEI00_RS06345 WP_022552384.1 1228487..1229455(+) (ceuB) [Campylobacter jejuni strain CJ029CC45]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDVALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=152841 AEI00_RS06345 WP_022552384.1 1228487..1229455(+) (ceuB) [Campylobacter jejuni strain CJ029CC45]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTTTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGCGAAGATG
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGTTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains


Predicted by InterproScan.

(15-317)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5T0GNF1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.068

100

0.991


Multiple sequence alignment