Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AEI18_RS07310 Genome accession   NZ_CP012237
Coordinates   1367456..1368424 (+) Length   322 a.a.
NCBI ID   WP_002874446.1    Uniprot ID   A0AB36G4C9
Organism   Campylobacter jejuni strain CJ075CC460     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1362456..1373424
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI18_RS07285 (AEI18_07305) cdsA 1363368..1364093 (-) 726 WP_002888102.1 phosphatidate cytidylyltransferase -
  AEI18_RS07290 (AEI18_07310) - 1364102..1364440 (-) 339 WP_002852397.1 hypothetical protein -
  AEI18_RS07295 (AEI18_07315) - 1364442..1365749 (-) 1308 WP_002888101.1 NFACT RNA binding domain-containing protein -
  AEI18_RS07300 (AEI18_07320) mobA 1365811..1366386 (+) 576 WP_002867312.1 molybdenum cofactor guanylyltransferase -
  AEI18_RS07305 (AEI18_07325) pldA 1366383..1367370 (+) 988 Protein_1436 phospholipase A -
  AEI18_RS07310 (AEI18_07330) ceuB 1367456..1368424 (+) 969 WP_002874446.1 ABC transporter permease Machinery gene
  AEI18_RS07315 (AEI18_07335) ceuC 1368417..1369355 (+) 939 WP_052800381.1 iron chelate uptake ABC transporter family permease subunit -
  AEI18_RS07320 (AEI18_07340) ceuD 1369352..1370107 (+) 756 WP_002896069.1 ABC transporter ATP-binding protein -
  AEI18_RS07325 - 1370120..1370275 (+) 156 WP_409557663.1 hypothetical protein -
  AEI18_RS07330 (AEI18_07345) ceuB 1370543..1371424 (+) 882 Protein_1441 enterochelin ABC transporter substrate-binding protein CeuB -
  AEI18_RS07340 (AEI18_07355) - 1371650..1372204 (-) 555 WP_052800379.1 hypothetical protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35455.37 Da        Isoelectric Point: 9.6678

>NTDB_id=152814 AEI18_RS07310 WP_002874446.1 1367456..1368424(+) (ceuB) [Campylobacter jejuni strain CJ075CC460]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQTIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=152814 AEI18_RS07310 WP_002874446.1 1367456..1368424(+) (ceuB) [Campylobacter jejuni strain CJ075CC460]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTATTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTTACTCAAACTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAAGGAAATTATGAATT
GCTCTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCACAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994

Multiple sequence alignment