Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI18_RS05960 | Genome accession | NZ_CP012237 |
| Coordinates | 1099041..1099343 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CJ075CC460 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1094041..1104343
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI18_RS05935 (AEI18_05965) | rpsR | 1094405..1094665 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI18_RS05940 (AEI18_05970) | lon | 1094726..1097101 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| AEI18_RS05945 (AEI18_05975) | - | 1097118..1097765 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| AEI18_RS05950 (AEI18_05980) | fliW | 1097924..1098313 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI18_RS05955 (AEI18_05985) | proC | 1098313..1099044 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI18_RS05960 (AEI18_05990) | ctsT | 1099041..1099343 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| AEI18_RS05965 (AEI18_05995) | - | 1099340..1100002 (+) | 663 | WP_002859149.1 | hypothetical protein | - |
| AEI18_RS05970 (AEI18_06000) | - | 1099999..1100451 (+) | 453 | WP_002874062.1 | hypothetical protein | - |
| AEI18_RS05975 (AEI18_06005) | hemD | 1100448..1101077 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| AEI18_RS05980 (AEI18_06010) | thiE | 1101055..1101687 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| AEI18_RS05985 (AEI18_06015) | thiD | 1101677..1102489 (-) | 813 | WP_032586361.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI18_RS05990 (AEI18_06020) | - | 1102486..1103172 (-) | 687 | WP_032586318.1 | endonuclease III domain-containing protein | - |
| AEI18_RS05995 (AEI18_06025) | - | 1103169..1103930 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=152807 AEI18_RS05960 WP_002853046.1 1099041..1099343(+) (ctsT) [Campylobacter jejuni strain CJ075CC460]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152807 AEI18_RS05960 WP_002853046.1 1099041..1099343(+) (ctsT) [Campylobacter jejuni strain CJ075CC460]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |