Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   AEI18_RS03560 Genome accession   NZ_CP012237
Coordinates   638249..638686 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain CJ075CC460     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 633249..643686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI18_RS03535 (AEI18_03555) - 633742..635328 (+) 1587 WP_260629650.1 DUF4118 domain-containing protein -
  AEI18_RS03540 - 635409..635561 (+) 153 WP_224374383.1 hypothetical protein -
  AEI18_RS03545 (AEI18_03560) uvrB 635663..637636 (-) 1974 WP_052800288.1 excinuclease ABC subunit UvrB -
  AEI18_RS03550 (AEI18_03565) - 637790..638020 (+) 231 WP_002852327.1 hypothetical protein -
  AEI18_RS03555 (AEI18_03570) - 638010..638252 (+) 243 WP_002852220.1 hypothetical protein -
  AEI18_RS03560 (AEI18_03575) Cj0683 638249..638686 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI18_RS03565 (AEI18_03580) priA 638668..640521 (+) 1854 WP_074470951.1 primosomal protein N' -
  AEI18_RS03570 (AEI18_03585) cipA 640531..641926 (-) 1396 Protein_703 DUF2972 domain-containing protein -
  AEI18_RS03575 (AEI18_03590) ispG 642072..643145 (+) 1074 WP_002854766.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=152804 AEI18_RS03560 WP_002852324.1 638249..638686(+) (Cj0683) [Campylobacter jejuni strain CJ075CC460]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=152804 AEI18_RS03560 WP_002852324.1 638249..638686(+) (Cj0683) [Campylobacter jejuni strain CJ075CC460]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAACCACTATAGATTTGCATTAAATGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1

Multiple sequence alignment