Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEH96_RS05260 | Genome accession | NZ_CP012235 |
| Coordinates | 998843..999145 (+) | Length | 100 a.a. |
| NCBI ID | WP_002866102.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ004CC45 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 993843..1004145
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEH96_RS05235 (AEH96_05270) | rpsR | 994205..994465 (+) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
| AEH96_RS05240 (AEH96_05275) | lon | 994526..996901 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| AEH96_RS05245 (AEH96_05280) | bamD | 996918..997565 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| AEH96_RS05250 (AEH96_05285) | fliW | 997726..998115 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEH96_RS05255 (AEH96_05290) | proC | 998115..998846 (+) | 732 | WP_115786705.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEH96_RS05260 (AEH96_05295) | ctsT | 998843..999145 (+) | 303 | WP_002866102.1 | type II secretion system protein | Machinery gene |
| AEH96_RS05265 (AEH96_05300) | - | 999142..999804 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| AEH96_RS05270 (AEH96_05305) | - | 999801..1000253 (+) | 453 | WP_032603535.1 | hypothetical protein | - |
| AEH96_RS05275 (AEH96_05310) | hemD | 1000250..1000879 (-) | 630 | WP_002866105.1 | uroporphyrinogen-III synthase | - |
| AEH96_RS05280 (AEH96_05315) | thiE | 1000857..1001489 (-) | 633 | WP_002866106.1 | thiamine phosphate synthase | - |
| AEH96_RS05285 (AEH96_05320) | thiD | 1001479..1002291 (-) | 813 | WP_002866107.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEH96_RS05290 (AEH96_05325) | - | 1002288..1002974 (-) | 687 | WP_002866108.1 | endonuclease III domain-containing protein | - |
| AEH96_RS05295 (AEH96_05330) | - | 1002971..1003732 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12149.27 Da Isoelectric Point: 9.0653
>NTDB_id=152779 AEH96_RS05260 WP_002866102.1 998843..999145(+) (ctsT) [Campylobacter jejuni strain CJ004CC45]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYKKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYKKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152779 AEH96_RS05260 WP_002866102.1 998843..999145(+) (ctsT) [Campylobacter jejuni strain CJ004CC45]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATAAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATAAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |