Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   AEI24_RS06715 Genome accession   NZ_CP012234
Coordinates   1281407..1282591 (-) Length   394 a.a.
NCBI ID   WP_002932552.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ048CCUA     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1276407..1287591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI24_RS06690 (AEI24_06650) fliL 1277554..1278090 (+) 537 WP_002868488.1 flagellar basal body-associated protein FliL -
  AEI24_RS06695 (AEI24_06655) acpS 1278091..1278438 (+) 348 WP_002825806.1 holo-ACP synthase -
  AEI24_RS06700 (AEI24_06660) - 1278439..1278858 (-) 420 WP_002862076.1 hypothetical protein -
  AEI24_RS06705 (AEI24_06665) - 1278855..1280216 (-) 1362 WP_002890764.1 cytochrome P450 -
  AEI24_RS06710 (AEI24_06670) - 1280213..1281334 (-) 1122 WP_002932553.1 hypothetical protein -
  AEI24_RS06715 (AEI24_06675) kpsS 1281407..1282591 (-) 1185 WP_002932552.1 capsule polysaccharide modification protein KpsS Regulator
  AEI24_RS06720 (AEI24_06680) kpsC 1282588..1284657 (-) 2070 WP_002932550.1 capsular polysaccharide biosynthesis protein -
  AEI24_RS06725 (AEI24_06685) cysC 1284654..1285166 (-) 513 WP_165434188.1 cytidine diphosphoramidate kinase -
  AEI24_RS06730 (AEI24_06690) - 1285301..1285594 (-) 294 WP_260629294.1 hypothetical protein -
  AEI24_RS06735 - 1285803..1286762 (-) 960 WP_207307215.1 hypothetical protein -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46828.53 Da        Isoelectric Point: 9.9031

>NTDB_id=152763 AEI24_RS06715 WP_002932552.1 1281407..1282591(-) (kpsS) [Campylobacter jejuni strain CJ048CCUA]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAMKMKKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=152763 AEI24_RS06715 WP_002932552.1 1281407..1282591(-) (kpsS) [Campylobacter jejuni strain CJ048CCUA]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAATGAAAATGAAAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGGACTAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAACGATTGTCGCATTATACATGCCAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAGGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGAGTGAATGCAAATTCTTCCTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAATAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAATCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAACGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAGAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTGTGTAATTTTAAGA
AATATCTTTTACAAACTAACCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.477

100

0.985


Multiple sequence alignment