Detailed information    

insolico Bioinformatically predicted

Overview


Name   Cj0683   Type   Machinery gene
Locus tag   AEI24_RS01375 Genome accession   NZ_CP012234
Coordinates   239605..240042 (+) Length   145 a.a.
NCBI ID   WP_165434285.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ048CCUA     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 234605..245042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI24_RS01355 (AEI24_01345) kdpD 235093..237024 (+) 1932 WP_002932500.1 sensor histidine kinase -
  AEI24_RS01360 (AEI24_01350) uvrB 237019..238992 (-) 1974 WP_165434286.1 excinuclease ABC subunit UvrB -
  AEI24_RS01365 (AEI24_01355) - 239146..239376 (+) 231 WP_002852327.1 hypothetical protein -
  AEI24_RS01370 (AEI24_01360) - 239366..239608 (+) 243 WP_002854947.1 hypothetical protein -
  AEI24_RS01375 (AEI24_01365) Cj0683 239605..240042 (+) 438 WP_165434285.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI24_RS01380 (AEI24_01370) priA 240024..241877 (+) 1854 WP_002932503.1 primosomal protein N' -
  AEI24_RS01385 - 241870..242013 (-) 144 Protein_274 sugar nucleotidyltransferase -
  AEI24_RS08620 - 241983..242153 (-) 171 Protein_275 DNA adenine methylase -
  AEI24_RS01390 (AEI24_01375) - 242131..242574 (+) 444 WP_002934531.1 helix-turn-helix transcriptional regulator -
  AEI24_RS01395 (AEI24_01380) - 242735..243040 (+) 306 WP_002877666.1 hypothetical protein -
  AEI24_RS01400 - 243274..243441 (+) 168 WP_002877668.1 hypothetical protein -
  AEI24_RS01405 - 243725..243811 (+) 87 Protein_279 SAM-dependent methyltransferase -

Sequence


Protein


Download         Length: 145 a.a.        Molecular weight: 16813.80 Da        Isoelectric Point: 8.0993

>NTDB_id=152749 AEI24_RS01375 WP_165434285.1 239605..240042(+) (Cj0683) [Campylobacter jejuni strain CJ048CCUA]
MNKAFTLLELFFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=152749 AEI24_RS01375 WP_165434285.1 239605..240042(+) (Cj0683) [Campylobacter jejuni strain CJ048CCUA]
ATGAATAAAGCTTTTACTTTGCTTGAGCTTTTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

99.31

100

0.993


Multiple sequence alignment