Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEH98_RS05295 | Genome accession | NZ_CP012233 |
| Coordinates | 994819..995019 (+) | Length | 66 a.a. |
| NCBI ID | WP_186820927.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ020CC45 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 989819..1000019
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEH98_RS05270 (AEH98_05320) | rpsR | 990181..990441 (+) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
| AEH98_RS05275 (AEH98_05325) | lon | 990502..992877 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| AEH98_RS05280 (AEH98_05330) | bamD | 992894..993541 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| AEH98_RS05285 (AEH98_05335) | fliW | 993702..994091 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEH98_RS05290 (AEH98_05340) | proC | 994091..994822 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEH98_RS05295 (AEH98_05345) | ctsT | 994819..995019 (+) | 201 | WP_186820927.1 | hypothetical protein | Machinery gene |
| AEH98_RS05300 (AEH98_05350) | - | 995117..995779 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| AEH98_RS05305 (AEH98_05355) | - | 995776..996228 (+) | 453 | WP_032603535.1 | hypothetical protein | - |
| AEH98_RS05310 (AEH98_05360) | hemD | 996225..996854 (-) | 630 | WP_002866105.1 | uroporphyrinogen-III synthase | - |
| AEH98_RS05315 (AEH98_05365) | thiE | 996832..997464 (-) | 633 | WP_038817203.1 | thiamine phosphate synthase | - |
| AEH98_RS05320 (AEH98_05370) | thiD | 997454..998266 (-) | 813 | WP_002864255.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEH98_RS05325 (AEH98_05375) | - | 998263..998949 (-) | 687 | WP_038817202.1 | endonuclease III domain-containing protein | - |
| AEH98_RS05330 (AEH98_05380) | - | 998946..999708 (-) | 763 | Protein_1041 | ATP-binding protein | - |
Sequence
Protein
Download Length: 66 a.a. Molecular weight: 8049.57 Da Isoelectric Point: 9.1788
>NTDB_id=152727 AEH98_RS05295 WP_186820927.1 994819..995019(+) (ctsT) [Campylobacter jejuni strain CJ020CC45]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPILKPSYFKLQP
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPILKPSYFKLQP
Nucleotide
Download Length: 201 bp
>NTDB_id=152727 AEH98_RS05295 WP_186820927.1 994819..995019(+) (ctsT) [Campylobacter jejuni strain CJ020CC45]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTAAAACCATCATACTTCAAACTTCAGCCTTAA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTAAAACCATCATACTTCAAACTTCAGCCTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
96.61 |
89.394 |
0.864 |