Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   AEI06_RS06850 Genome accession   NZ_CP012232
Coordinates   1315623..1316807 (-) Length   394 a.a.
NCBI ID   WP_022552397.1    Uniprot ID   A0AA44HKV0
Organism   Campylobacter jejuni strain CJ511CC45     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1310623..1321807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI06_RS06825 (AEI06_06855) fliL 1311772..1312308 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  AEI06_RS06830 (AEI06_06860) acpS 1312308..1312655 (+) 348 WP_002825806.1 holo-ACP synthase -
  AEI06_RS06835 (AEI06_06865) - 1312656..1313075 (-) 420 WP_002880391.1 hypothetical protein -
  AEI06_RS06840 (AEI06_06870) - 1313072..1314433 (-) 1362 WP_014517093.1 cytochrome P450 -
  AEI06_RS06845 (AEI06_06875) - 1314430..1315551 (-) 1122 WP_022552396.1 hypothetical protein -
  AEI06_RS06850 (AEI06_06880) kpsS 1315623..1316807 (-) 1185 WP_022552397.1 capsule polysaccharide modification protein KpsS Regulator
  AEI06_RS06855 (AEI06_06885) kpsC 1316804..1318873 (-) 2070 WP_053869590.1 capsular polysaccharide biosynthesis protein -
  AEI06_RS06860 (AEI06_06890) - 1318951..1320204 (-) 1254 WP_053869589.1 cation:proton antiporter -
  AEI06_RS06865 (AEI06_06895) - 1320214..1321173 (-) 960 WP_053869588.1 pyruvate kinase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46772.53 Da        Isoelectric Point: 9.9368

>NTDB_id=152708 AEI06_RS06850 WP_022552397.1 1315623..1316807(-) (kpsS) [Campylobacter jejuni strain CJ511CC45]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHLLAIKMKKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGVEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPILACNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=152708 AEI06_RS06850 WP_022552397.1 1315623..1316807(-) (kpsS) [Campylobacter jejuni strain CJ511CC45]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGACCTGTGGGAAATTTTTT
TCACCTTCTTGCAATAAAAATGAAAAAAAAACAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAGTTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCCTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCCCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATACAGAAAATATCTTTACAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGTTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAGAAGCTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTATTTTGGCATGTAATTTTAAGA
AATACCTTTTACAAACTAATCAATTCAACGGCAATTTTTACAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

97.208

100

0.972


Multiple sequence alignment