Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI06_RS05220 | Genome accession | NZ_CP012232 |
| Coordinates | 987152..987454 (+) | Length | 100 a.a. |
| NCBI ID | WP_002877750.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ511CC45 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 982152..992454
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI06_RS05195 (AEI06_05230) | rpsR | 982514..982774 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI06_RS05200 (AEI06_05235) | lon | 982835..985210 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| AEI06_RS05205 (AEI06_05240) | bamD | 985227..985874 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| AEI06_RS05210 (AEI06_05245) | fliW | 986035..986424 (+) | 390 | WP_002877749.1 | flagellar assembly protein FliW | - |
| AEI06_RS05215 (AEI06_05250) | proC | 986424..987155 (+) | 732 | WP_002855729.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI06_RS05220 (AEI06_05255) | ctsT | 987152..987454 (+) | 303 | WP_002877750.1 | hypothetical protein | Machinery gene |
| AEI06_RS05225 (AEI06_05260) | - | 987451..988113 (+) | 663 | WP_002877751.1 | hypothetical protein | - |
| AEI06_RS05230 (AEI06_05265) | - | 988110..988562 (+) | 453 | WP_002877757.1 | hypothetical protein | - |
| AEI06_RS05235 (AEI06_05270) | hemD | 988559..989188 (-) | 630 | WP_002877758.1 | uroporphyrinogen-III synthase | - |
| AEI06_RS05240 (AEI06_05275) | thiE | 989166..989798 (-) | 633 | WP_002877759.1 | thiamine phosphate synthase | - |
| AEI06_RS05245 (AEI06_05280) | thiD | 989788..990600 (-) | 813 | WP_002877760.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI06_RS05250 (AEI06_05285) | - | 990597..991283 (-) | 687 | WP_002866108.1 | endonuclease III domain-containing protein | - |
| AEI06_RS05255 (AEI06_05290) | - | 991280..992041 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12138.20 Da Isoelectric Point: 7.0039
>NTDB_id=152699 AEI06_RS05220 WP_002877750.1 987152..987454(+) (ctsT) [Campylobacter jejuni strain CJ511CC45]
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152699 AEI06_RS05220 WP_002877750.1 987152..987454(+) (ctsT) [Campylobacter jejuni strain CJ511CC45]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |