Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI12_RS04985 | Genome accession | NZ_CP012230 |
| Coordinates | 955939..956241 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CJ517CC45 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 950939..961241
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI12_RS04960 (AEI12_05005) | rpsR | 951302..951562 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI12_RS04965 (AEI12_05010) | lon | 951622..953997 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| AEI12_RS04970 (AEI12_05015) | bamD | 954014..954661 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| AEI12_RS04975 (AEI12_05020) | fliW | 954822..955211 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI12_RS04980 (AEI12_05025) | proC | 955211..955942 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI12_RS04985 (AEI12_05030) | ctsT | 955939..956241 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| AEI12_RS04990 (AEI12_05035) | - | 956238..956900 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| AEI12_RS04995 (AEI12_05040) | - | 956897..957349 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| AEI12_RS05000 (AEI12_05045) | hemD | 957346..957975 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| AEI12_RS05005 (AEI12_05050) | thiE | 957953..958585 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| AEI12_RS05010 (AEI12_05055) | thiD | 958575..959387 (-) | 813 | WP_002871792.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI12_RS05015 (AEI12_05060) | - | 959384..960070 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| AEI12_RS05020 (AEI12_05065) | - | 960067..960828 (-) | 762 | WP_002871793.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=152673 AEI12_RS04985 WP_002853046.1 955939..956241(+) (ctsT) [Campylobacter jejuni strain CJ517CC45]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152673 AEI12_RS04985 WP_002853046.1 955939..956241(+) (ctsT) [Campylobacter jejuni strain CJ517CC45]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |