Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   AEH99_RS06320 Genome accession   NZ_CP012227
Coordinates   1223091..1224059 (+) Length   322 a.a.
NCBI ID   WP_053869879.1    Uniprot ID   A0A5Y9FR11
Organism   Campylobacter jejuni strain CJ021CC45     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1218091..1229059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEH99_RS06295 (AEH99_06320) cdsA 1219001..1219726 (-) 726 WP_002858027.1 phosphatidate cytidylyltransferase -
  AEH99_RS06300 (AEH99_06325) - 1219735..1220073 (-) 339 WP_022552380.1 hypothetical protein -
  AEH99_RS06305 (AEH99_06330) - 1220075..1221382 (-) 1308 WP_022552381.1 NFACT RNA binding domain-containing protein -
  AEH99_RS06310 (AEH99_06335) mobA 1221444..1222019 (+) 576 WP_022552382.1 molybdenum cofactor guanylyltransferase -
  AEH99_RS06315 (AEH99_06340) pldA 1222016..1223005 (+) 990 WP_022552383.1 phospholipase A -
  AEH99_RS06320 (AEH99_06345) ceuB 1223091..1224059 (+) 969 WP_053869879.1 ABC transporter permease Machinery gene
  AEH99_RS06325 (AEH99_06350) ceuC 1224052..1224990 (+) 939 WP_002866771.1 iron chelate uptake ABC transporter family permease subunit -
  AEH99_RS06330 (AEH99_06355) ceuD 1224987..1225742 (+) 756 WP_002866772.1 ABC transporter ATP-binding protein -
  AEH99_RS06335 (AEH99_06360) ceuB 1225755..1226747 (+) 993 WP_139847759.1 enterochelin ABC transporter substrate-binding protein CeuB -
  AEH99_RS06340 (AEH99_06365) - 1226903..1227124 (+) 222 WP_002853781.1 hypothetical protein -
  AEH99_RS06345 (AEH99_06370) - 1227125..1227406 (+) 282 WP_002866775.1 type II toxin-antitoxin system RelE/ParE family toxin -
  AEH99_RS06355 (AEH99_06380) - 1227768..1228322 (-) 555 WP_002855904.1 membrane protein -

Sequence


Protein


Download         Length: 322 a.a.        Molecular weight: 35407.31 Da        Isoelectric Point: 9.6678

>NTDB_id=152599 AEH99_RS06320 WP_053869879.1 1223091..1224059(+) (ceuB) [Campylobacter jejuni strain CJ021CC45]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVIQGNYELLYISLPLFILAYFLAHKITIVGMGEDVALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=152599 AEH99_RS06320 WP_053869879.1 1223091..1224059(+) (ceuB) [Campylobacter jejuni strain CJ021CC45]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTTTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATACAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGCGAAGATG
TAGCTTTAAATCTTGGAATTTCTTATAATGGTATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGTTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains


Predicted by InterproScan.

(15-317)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5Y9FR11

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

98.758

100

0.988


Multiple sequence alignment