Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEH99_RS04980 | Genome accession | NZ_CP012227 |
| Coordinates | 958364..958666 (+) | Length | 100 a.a. |
| NCBI ID | WP_002877750.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ021CC45 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 953364..963666
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEH99_RS04955 (AEH99_04980) | rpsR | 953726..953986 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEH99_RS04960 (AEH99_04985) | lon | 954047..956422 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| AEH99_RS04965 (AEH99_04990) | bamD | 956439..957086 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| AEH99_RS04970 (AEH99_04995) | fliW | 957247..957636 (+) | 390 | WP_002877749.1 | flagellar assembly protein FliW | - |
| AEH99_RS04975 (AEH99_05000) | proC | 957636..958367 (+) | 732 | WP_002855729.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEH99_RS04980 (AEH99_05005) | ctsT | 958364..958666 (+) | 303 | WP_002877750.1 | hypothetical protein | Machinery gene |
| AEH99_RS04985 (AEH99_05010) | - | 958663..959325 (+) | 663 | WP_002877751.1 | hypothetical protein | - |
| AEH99_RS04990 (AEH99_05015) | - | 959322..959774 (+) | 453 | WP_002877757.1 | hypothetical protein | - |
| AEH99_RS04995 (AEH99_05020) | hemD | 959771..960400 (-) | 630 | WP_002877758.1 | uroporphyrinogen-III synthase | - |
| AEH99_RS05000 (AEH99_05025) | thiE | 960378..961010 (-) | 633 | WP_002877759.1 | thiamine phosphate synthase | - |
| AEH99_RS05005 (AEH99_05030) | thiD | 961000..961812 (-) | 813 | WP_002877760.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEH99_RS05010 (AEH99_05035) | - | 961809..962495 (-) | 687 | WP_002866108.1 | endonuclease III domain-containing protein | - |
| AEH99_RS05015 (AEH99_05040) | - | 962492..963253 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12138.20 Da Isoelectric Point: 7.0039
>NTDB_id=152592 AEH99_RS04980 WP_002877750.1 958364..958666(+) (ctsT) [Campylobacter jejuni strain CJ021CC45]
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYHYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFINDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152592 AEH99_RS04980 WP_002877750.1 958364..958666(+) (ctsT) [Campylobacter jejuni strain CJ021CC45]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATCA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTATTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGTGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |