Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   AEI21_RS06750 Genome accession   NZ_CP012224
Coordinates   1306623..1307807 (-) Length   394 a.a.
NCBI ID   WP_002887977.1    Uniprot ID   A0A0S2CFQ6
Organism   Campylobacter jejuni strain CJ066CC508     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1301623..1312807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI21_RS06725 (AEI21_06715) fliL 1302770..1303306 (+) 537 WP_002877383.1 flagellar basal body-associated protein FliL -
  AEI21_RS06730 (AEI21_06720) acpS 1303307..1303654 (+) 348 WP_002825806.1 holo-ACP synthase -
  AEI21_RS06735 (AEI21_06725) - 1303655..1304074 (-) 420 WP_002922774.1 hypothetical protein -
  AEI21_RS06740 (AEI21_06730) - 1304071..1305432 (-) 1362 WP_052775676.1 cytochrome P450 -
  AEI21_RS06745 (AEI21_06735) - 1305429..1306550 (-) 1122 WP_052775677.1 hypothetical protein -
  AEI21_RS06750 (AEI21_06740) kpsS 1306623..1307807 (-) 1185 WP_002887977.1 capsule polysaccharide modification protein KpsS Regulator
  AEI21_RS06755 (AEI21_06745) kpsC 1307804..1309873 (-) 2070 WP_052775678.1 capsular polysaccharide biosynthesis protein -
  AEI21_RS06760 (AEI21_06750) cysC 1309870..1310382 (-) 513 WP_074470094.1 cytidine diphosphoramidate kinase -
  AEI21_RS06765 (AEI21_06755) - 1310372..1311133 (-) 762 WP_002922638.1 CTP:phosphoglutamine cytidylyltransferase -
  AEI21_RS06770 (AEI21_06760) - 1311135..1311737 (-) 603 WP_002872737.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46853.52 Da        Isoelectric Point: 9.8673

>NTDB_id=152574 AEI21_RS06750 WP_002887977.1 1306623..1307807(-) (kpsS) [Campylobacter jejuni strain CJ066CC508]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAIRMEKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=152574 AEI21_RS06750 WP_002887977.1 1306623..1307807(-) (kpsS) [Campylobacter jejuni strain CJ066CC508]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAATAAGAATGGAAAAAAAACAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAATAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCTTTATATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAATCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGTTATAAGAATTATTCTAAACTCATAAACGATTTAAGTCAAAAATATCATGTAG
AGGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTAGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTGTGTAATTTTAAGA
AATATCTTTTACAAACTAACCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0S2CFQ6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

97.97

100

0.98


Multiple sequence alignment