Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | AEI21_RS05425 | Genome accession | NZ_CP012224 |
| Coordinates | 1038334..1039284 (+) | Length | 316 a.a. |
| NCBI ID | WP_052775522.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ066CC508 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1033334..1044284
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI21_RS05400 (AEI21_05390) | neuB | 1033838..1034878 (+) | 1041 | WP_002922930.1 | N-acetylneuraminate synthase | - |
| AEI21_RS05405 (AEI21_05395) | neuC | 1034875..1035993 (+) | 1119 | WP_002922931.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| AEI21_RS05410 (AEI21_05400) | - | 1035990..1036655 (+) | 666 | WP_002922934.1 | acylneuraminate cytidylyltransferase family protein | - |
| AEI21_RS08720 | - | 1036643..1036834 (+) | 192 | WP_002922937.1 | hypothetical protein | - |
| AEI21_RS08770 (AEI21_05405) | - | 1036800..1037471 (+) | 672 | WP_284497596.1 | CatB-related O-acetyltransferase | - |
| AEI21_RS05420 (AEI21_05410) | - | 1037463..1038275 (-) | 813 | WP_002922943.1 | glycosyltransferase family 2 protein | - |
| AEI21_RS05425 (AEI21_05415) | waaF | 1038334..1039284 (+) | 951 | WP_052775522.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| AEI21_RS08805 (AEI21_05420) | - | 1039270..1040044 (-) | 775 | Protein_1061 | glycosyltransferase family 25 protein | - |
| AEI21_RS05435 (AEI21_05425) | gmhA | 1040044..1040604 (-) | 561 | WP_002922730.1 | D-sedoheptulose 7-phosphate isomerase | - |
| AEI21_RS05440 (AEI21_05430) | rfaE1 | 1040601..1041986 (-) | 1386 | WP_002922733.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| AEI21_RS05445 (AEI21_05435) | rfaD | 1041979..1042932 (-) | 954 | WP_002922734.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| AEI21_RS05450 (AEI21_05440) | gmhB | 1042933..1043493 (-) | 561 | WP_002878815.1 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| AEI21_RS05455 (AEI21_05445) | - | 1043575..1043877 (+) | 303 | WP_002852762.1 | cytochrome c | - |
| AEI21_RS05460 (AEI21_05450) | ccoS | 1043900..1044106 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 316 a.a. Molecular weight: 36293.94 Da Isoelectric Point: 10.3523
>NTDB_id=152567 AEI21_RS05425 WP_052775522.1 1038334..1039284(+) (waaF) [Campylobacter jejuni strain CJ066CC508]
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQTRYKQALSLRKKLGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQTRYKQALSLRKKLGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI
Nucleotide
Download Length: 951 bp
>NTDB_id=152567 AEI21_RS05425 WP_052775522.1 1038334..1039284(+) (waaF) [Campylobacter jejuni strain CJ066CC508]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAAACCCGCTACAAACAAGCCCTATCTTTACGCAAAAAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCATAAATGCATGAAAGATTTAAAGCCTGAAGTGATTTTAAAAGCAATTCAAAATTTAATTAATATCTAA
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAAACCCGCTACAAACAAGCCCTATCTTTACGCAAAAAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCATAAATGCATGAAAGATTTAAAGCCTGAAGTGATTTTAAAAGCAATTCAAAATTTAATTAATATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
93.949 |
99.367 |
0.934 |