Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI21_RS05090 | Genome accession | NZ_CP012224 |
| Coordinates | 970789..971091 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain CJ066CC508 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 965789..976091
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI21_RS05065 (AEI21_05050) | rpsR | 966152..966412 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI21_RS05070 (AEI21_05055) | lon | 966472..968847 (-) | 2376 | WP_002921392.1 | endopeptidase La | - |
| AEI21_RS05075 (AEI21_05060) | - | 968864..969511 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| AEI21_RS05080 (AEI21_05065) | fliW | 969672..970061 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI21_RS05085 (AEI21_05070) | proC | 970061..970792 (+) | 732 | WP_002921390.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI21_RS05090 (AEI21_05075) | ctsT | 970789..971091 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| AEI21_RS05095 (AEI21_05080) | - | 971088..971750 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| AEI21_RS05100 (AEI21_05085) | - | 971747..972199 (+) | 453 | WP_002921385.1 | hypothetical protein | - |
| AEI21_RS05105 (AEI21_05090) | hemD | 972196..972825 (-) | 630 | WP_002921384.1 | uroporphyrinogen-III synthase | - |
| AEI21_RS05110 (AEI21_05095) | thiE | 972803..973435 (-) | 633 | WP_002921383.1 | thiamine phosphate synthase | - |
| AEI21_RS05115 (AEI21_05100) | thiD | 973425..974237 (-) | 813 | WP_002921381.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI21_RS05120 (AEI21_05105) | - | 974234..974920 (-) | 687 | WP_052775526.1 | 3-methyladenine DNA glycosylase | - |
| AEI21_RS05125 (AEI21_05110) | - | 974917..975678 (-) | 762 | WP_002921377.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=152565 AEI21_RS05090 WP_002855822.1 970789..971091(+) (ctsT) [Campylobacter jejuni strain CJ066CC508]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152565 AEI21_RS05090 WP_002855822.1 970789..971091(+) (ctsT) [Campylobacter jejuni strain CJ066CC508]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTCAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTCAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |