Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | AEH97_RS05595 | Genome accession | NZ_CP012222 |
| Coordinates | 1063937..1064887 (+) | Length | 316 a.a. |
| NCBI ID | WP_002866164.1 | Uniprot ID | Q9ALT6 |
| Organism | Campylobacter jejuni strain CJ007CC45 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1042586..1076924 | 1063937..1064887 | within | 0 |
Gene organization within MGE regions
Location: 1042586..1076924
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEH97_RS05475 (AEH97_05515) | pglI | 1042586..1043515 (-) | 930 | WP_002866141.1 | GalNAc(5)-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase | - |
| AEH97_RS05480 (AEH97_05520) | pglH | 1043508..1044587 (-) | 1080 | WP_072238645.1 | GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)- diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase | - |
| AEH97_RS05485 (AEH97_05525) | pglK | 1044584..1046278 (-) | 1695 | WP_002877063.1 | ABC-type lipopolysaccharide transporter PglK | - |
| AEH97_RS05490 (AEH97_05530) | galE | 1046272..1047258 (-) | 987 | WP_002877060.1 | UDP-glucose 4-epimerase GalE | - |
| AEH97_RS05495 (AEH97_05535) | - | 1047317..1048111 (-) | 795 | WP_002877059.1 | 3'-5' exonuclease | - |
| AEH97_RS05500 (AEH97_05540) | waaC | 1048177..1049205 (+) | 1029 | WP_002866145.1 | lipopolysaccharide heptosyltransferase I | - |
| AEH97_RS05505 (AEH97_05545) | htrB | 1049195..1050073 (+) | 879 | WP_002801091.1 | lipid A biosynthesis lauroyl acyltransferase HtrB | - |
| AEH97_RS05510 (AEH97_05550) | - | 1050070..1050771 (+) | 702 | WP_002869594.1 | glycosyltransferase family 2 protein | - |
| AEH97_RS05515 (AEH97_05555) | rfbA | 1050782..1051660 (+) | 879 | WP_002869595.1 | glucose-1-phosphate thymidylyltransferase RfbA | - |
| AEH97_RS05520 (AEH97_05560) | rfbB | 1051660..1052691 (+) | 1032 | WP_002860226.1 | dTDP-glucose 4,6-dehydratase | - |
| AEH97_RS05525 (AEH97_05565) | wlaRA | 1052694..1053116 (+) | 423 | WP_087695460.1 | class E lipooligosaccharide biosynthesis 3,4-ketoisomerase WlaRA | - |
| AEH97_RS05530 (AEH97_05570) | wlaRB | 1053138..1053542 (+) | 405 | WP_002860228.1 | class E lipooligosaccharide biosynthesis 3,4-ketoisomerase WlaRB | - |
| AEH97_RS05535 (AEH97_05575) | - | 1053532..1053975 (+) | 444 | WP_020247173.1 | N-acetyltransferase | - |
| AEH97_RS05540 (AEH97_05580) | - | 1053997..1054524 (+) | 528 | WP_002869598.1 | GNAT family N-acetyltransferase | - |
| AEH97_RS08705 | - | 1054545..1054802 (+) | 258 | Protein_1087 | hypothetical protein | - |
| AEH97_RS05545 (AEH97_05585) | - | 1054821..1055885 (+) | 1065 | WP_002869599.1 | glycosyltransferase family 2 protein | - |
| AEH97_RS05550 (AEH97_05590) | - | 1055898..1056950 (+) | 1053 | WP_002869601.1 | glycosyltransferase family 2 protein | - |
| AEH97_RS05555 (AEH97_05595) | wlaRG | 1056916..1058001 (+) | 1086 | WP_025998025.1 | class E lipooligosaccharide biosynthesis aminotransferase WlaRG | - |
| AEH97_RS05560 (AEH97_05600) | - | 1058028..1059287 (-) | 1260 | WP_022552326.1 | DUF2972 domain-containing protein | - |
| AEH97_RS08650 (AEH97_05605) | - | 1059284..1060308 (-) | 1025 | Protein_1092 | hypothetical protein | - |
| AEH97_RS05575 (AEH97_05610) | - | 1060379..1061152 (+) | 774 | WP_002866160.1 | glycosyltransferase family 25 protein | - |
| AEH97_RS05580 (AEH97_05615) | wlaTB | 1061145..1062101 (+) | 957 | WP_002891855.1 | class E lipooligosaccharide biosynthesis protein WlaTB | - |
| AEH97_RS05585 (AEH97_05620) | wlaTC | 1062098..1063057 (+) | 960 | WP_002891853.1 | class E lipooligosaccharide biosynthesis protein WlaTC | - |
| AEH97_RS05590 (AEH97_05625) | waaV | 1063060..1063878 (-) | 819 | WP_002877115.1 | glycosyltransferase family 2 protein | - |
| AEH97_RS05595 (AEH97_05630) | waaF | 1063937..1064887 (+) | 951 | WP_002866164.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| AEH97_RS05600 (AEH97_05635) | - | 1064939..1066438 (+) | 1500 | WP_002877116.1 | MBOAT family O-acyltransferase | - |
| AEH97_RS05605 (AEH97_05640) | - | 1066586..1067563 (+) | 978 | WP_002866168.1 | hypothetical protein | - |
| AEH97_RS05610 (AEH97_05645) | gmhA | 1067567..1068127 (-) | 561 | WP_002877119.1 | D-sedoheptulose 7-phosphate isomerase | - |
| AEH97_RS05615 (AEH97_05650) | rfaE1 | 1068124..1069509 (-) | 1386 | WP_022552328.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| AEH97_RS05620 (AEH97_05655) | rfaD | 1069502..1070455 (-) | 954 | WP_022552329.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| AEH97_RS05625 (AEH97_05660) | gmhB | 1070456..1071016 (-) | 561 | WP_002877124.1 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| AEH97_RS05630 (AEH97_05665) | - | 1071098..1071400 (+) | 303 | WP_022552330.1 | c-type cytochrome | - |
| AEH97_RS05635 (AEH97_05670) | ccoS | 1071423..1071629 (-) | 207 | WP_002877126.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
| AEH97_RS05640 (AEH97_05675) | - | 1071626..1073983 (-) | 2358 | WP_260627255.1 | heavy metal translocating P-type ATPase | - |
| AEH97_RS05645 (AEH97_05680) | rho | 1074093..1075391 (+) | 1299 | WP_002853705.1 | transcription termination factor Rho | - |
| AEH97_RS05650 (AEH97_05685) | dnaX | 1075395..1076924 (+) | 1530 | WP_002866174.1 | DNA polymerase III subunit gamma/tau | - |
Sequence
Protein
Download Length: 316 a.a. Molecular weight: 36378.95 Da Isoelectric Point: 10.3102
>NTDB_id=152540 AEH97_RS05595 WP_002866164.1 1063937..1064887(+) (waaF) [Campylobacter jejuni strain CJ007CC45]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNTQFILYGSLVSTALFREFPNSKIIIENKQTRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISTVYKIKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEEIKKLSTP
MKIFIHLPTWLGDAVMASPALYAIKEHFKNTQFILYGSLVSTALFREFPNSKIIIENKQTRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISTVYKIKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEEIKKLSTP
Nucleotide
Download Length: 951 bp
>NTDB_id=152540 AEH97_RS05595 WP_002866164.1 1063937..1064887(+) (waaF) [Campylobacter jejuni strain CJ007CC45]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATACCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAGGGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAAACCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTACGGTTTATAAGATAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGTCCTTTAAAGC
ACCATAAATGCATGAAAGATCTAAAGCCTGAAAAGGTGATAGAAGAAATTAAAAAATTAAGCACTCCATAA
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATACCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAGGGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAAACCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTACGGTTTATAAGATAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGTCCTTTAAAGC
ACCATAAATGCATGAAAGATCTAAAGCCTGAAAAGGTGATAGAAGAAATTAAAAAATTAAGCACTCCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
94.249 |
99.051 |
0.934 |