Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AEI23_RS07460 Genome accession   NZ_CP012221
Coordinates   1383722..1384690 (+) Length   322 a.a.
NCBI ID   WP_002874446.1    Uniprot ID   A0AB36G4C9
Organism   Campylobacter jejuni strain CJ018CCUA     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1378722..1389690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI23_RS07435 (AEI23_07455) cdsA 1379632..1380357 (-) 726 WP_115766856.1 phosphatidate cytidylyltransferase -
  AEI23_RS07440 (AEI23_07460) - 1380366..1380704 (-) 339 WP_002855905.1 hypothetical protein -
  AEI23_RS07445 (AEI23_07465) - 1380706..1382013 (-) 1308 WP_052814048.1 NFACT family protein -
  AEI23_RS07450 (AEI23_07470) mobA 1382075..1382650 (+) 576 WP_052814047.1 molybdenum cofactor guanylyltransferase -
  AEI23_RS07455 (AEI23_07475) pldA 1382647..1383636 (+) 990 WP_052814046.1 phospholipase A -
  AEI23_RS07460 (AEI23_07480) ceuB 1383722..1384690 (+) 969 WP_002874446.1 ABC transporter permease Machinery gene
  AEI23_RS07465 (AEI23_07485) ceuC 1384683..1385621 (+) 939 WP_052814045.1 iron chelate uptake ABC transporter family permease subunit -
  AEI23_RS07470 (AEI23_07490) ceuD 1385618..1386373 (+) 756 WP_052786822.1 ABC transporter ATP-binding protein -
  AEI23_RS07475 (AEI23_07495) ceuB 1386386..1387378 (+) 993 WP_044260692.1 enterochelin ABC transporter substrate-binding protein CeuB -
  AEI23_RS07485 (AEI23_07505) - 1387605..1388159 (-) 555 WP_002855904.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35455.37 Da        Isoelectric Point: 9.6678

>NTDB_id=152517 AEI23_RS07460 WP_002874446.1 1383722..1384690(+) (ceuB) [Campylobacter jejuni strain CJ018CCUA]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQTIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=152517 AEI23_RS07460 WP_002874446.1 1383722..1384690(+) (ceuB) [Campylobacter jejuni strain CJ018CCUA]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATCCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTTACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTTACTCAAACTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAAGGAAATTATGAATT
ACTTTACATTTCTTTGCCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGTGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994

Multiple sequence alignment