Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | AEI23_RS06285 | Genome accession | NZ_CP012221 |
| Coordinates | 1158091..1159041 (+) | Length | 316 a.a. |
| NCBI ID | WP_002872238.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ018CCUA | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1153091..1164041
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI23_RS06265 (AEI23_06290) | - | 1153584..1155134 (+) | 1551 | WP_115766837.1 | glycosyltransferase | - |
| AEI23_RS06270 (AEI23_06295) | - | 1155103..1155990 (-) | 888 | WP_002872235.1 | glycosyltransferase family 2 protein | - |
| AEI23_RS06275 (AEI23_06300) | - | 1156016..1156849 (-) | 834 | WP_251822392.1 | glycosyltransferase | - |
| AEI23_RS10005 | - | 1156857..1157162 (-) | 306 | WP_251822393.1 | hypothetical protein | - |
| AEI23_RS06280 (AEI23_06305) | - | 1157211..1158032 (-) | 822 | WP_002872237.1 | glycosyltransferase family 2 protein | - |
| AEI23_RS06285 (AEI23_06310) | waaF | 1158091..1159041 (+) | 951 | WP_002872238.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| AEI23_RS06290 (AEI23_06315) | - | 1159027..1159791 (-) | 765 | WP_002872239.1 | glycosyltransferase family 25 protein | - |
| AEI23_RS06295 (AEI23_06320) | gmhA | 1159791..1160351 (-) | 561 | WP_002868599.1 | D-sedoheptulose 7-phosphate isomerase | - |
| AEI23_RS06300 (AEI23_06325) | rfaE1 | 1160348..1161733 (-) | 1386 | WP_115766838.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| AEI23_RS06305 (AEI23_06330) | rfaD | 1161726..1162679 (-) | 954 | WP_002867398.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| AEI23_RS06310 (AEI23_06335) | gmhB | 1162680..1163241 (-) | 562 | Protein_1239 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| AEI23_RS06315 (AEI23_06340) | - | 1163322..1163624 (+) | 303 | WP_002852762.1 | cytochrome c | - |
| AEI23_RS06320 (AEI23_06345) | ccoS | 1163603..1163854 (-) | 252 | WP_115766839.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 316 a.a. Molecular weight: 36305.91 Da Isoelectric Point: 10.3316
>NTDB_id=152511 AEI23_RS06285 WP_002872238.1 1158091..1159041(+) (waaF) [Campylobacter jejuni strain CJ018CCUA]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLGIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLINI
Nucleotide
Download Length: 951 bp
>NTDB_id=152511 AEI23_RS06285 WP_002872238.1 1158091..1159041(+) (waaF) [Campylobacter jejuni strain CJ018CCUA]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGCATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCACGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAATTAATATCTAA
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGGCATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCACGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAATTAATATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
92.994 |
99.367 |
0.924 |