Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   AEI23_RS03440 Genome accession   NZ_CP012221
Coordinates   619286..619723 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain CJ018CCUA     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 614286..624723
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI23_RS03420 (AEI23_03425) kdpD 614784..616598 (+) 1815 WP_002872606.1 DUF4118 domain-containing protein -
  AEI23_RS03425 (AEI23_03430) uvrB 616700..618673 (-) 1974 WP_052799392.1 excinuclease ABC subunit UvrB -
  AEI23_RS03430 (AEI23_03435) - 618827..619057 (+) 231 WP_002852327.1 hypothetical protein -
  AEI23_RS03435 (AEI23_03440) - 619047..619289 (+) 243 WP_002854947.1 hypothetical protein -
  AEI23_RS03440 (AEI23_03445) Cj0683 619286..619723 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI23_RS03445 (AEI23_03450) priA 619705..621558 (+) 1854 WP_002872608.1 primosomal protein N' -
  AEI23_RS03450 (AEI23_03455) cipA 621568..622962 (-) 1395 WP_002872609.1 DUF2972 domain-containing protein -
  AEI23_RS03455 (AEI23_03460) ispG 623108..624181 (+) 1074 WP_002854766.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=152506 AEI23_RS03440 WP_002852324.1 619286..619723(+) (Cj0683) [Campylobacter jejuni strain CJ018CCUA]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=152506 AEI23_RS03440 WP_002852324.1 619286..619723(+) (Cj0683) [Campylobacter jejuni strain CJ018CCUA]
ATGAACAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAATGCTAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1

Multiple sequence alignment