Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   AEI22_RS06470 Genome accession   NZ_CP012220
Coordinates   1245766..1246950 (-) Length   394 a.a.
NCBI ID   WP_002868491.1    Uniprot ID   A0A0Q3JWH1
Organism   Campylobacter jejuni strain CJ090CC1332     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1240766..1251950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI22_RS06445 (AEI22_06420) fliL 1241915..1242451 (+) 537 WP_002855429.1 flagellar basal body-associated protein FliL -
  AEI22_RS06450 (AEI22_06425) acpS 1242451..1242798 (+) 348 WP_002825806.1 holo-ACP synthase -
  AEI22_RS06455 (AEI22_06430) - 1242799..1243218 (-) 420 WP_002780440.1 hypothetical protein -
  AEI22_RS06460 (AEI22_06435) - 1243215..1244576 (-) 1362 WP_002780438.1 cytochrome P450 -
  AEI22_RS06465 (AEI22_06440) - 1244573..1245694 (-) 1122 WP_085782221.1 DUF829 domain-containing protein -
  AEI22_RS06470 (AEI22_06445) kpsS 1245766..1246950 (-) 1185 WP_002868491.1 capsule polysaccharide modification protein KpsS Regulator
  AEI22_RS06475 (AEI22_06450) kpsC 1246947..1249016 (-) 2070 WP_115794619.1 capsular polysaccharide biosynthesis protein -
  AEI22_RS06480 (AEI22_06455) cysC 1249013..1249525 (-) 513 WP_087704287.1 cytidine diphosphoramidate kinase -
  AEI22_RS06485 (AEI22_06460) - 1249515..1250276 (-) 762 WP_002871991.1 CTP:phosphoglutamine cytidylyltransferase -
  AEI22_RS06490 (AEI22_06465) - 1250278..1250880 (-) 603 WP_052798026.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46855.56 Da        Isoelectric Point: 9.9031

>NTDB_id=152491 AEI22_RS06470 WP_002868491.1 1245766..1246950(-) (kpsS) [Campylobacter jejuni strain CJ090CC1332]
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLAMKMKKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQNKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=152491 AEI22_RS06470 WP_002868491.1 1245766..1246950(-) (kpsS) [Campylobacter jejuni strain CJ090CC1332]
ATGAGATTTAGCACTAAAATTAAAAAAGAATTTAGCGGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAATGAAAATGAAAAAAAACCAAACCAAAGTTTTTAAACTCAATTTTAACGGCGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGTGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAATAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGCATTATACATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTAGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Q3JWH1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

98.731

100

0.987


Multiple sequence alignment