Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AEI22_RS06185 Genome accession   NZ_CP012220
Coordinates   1185982..1186950 (+) Length   322 a.a.
NCBI ID   WP_115794609.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ090CC1332     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1180982..1191950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI22_RS06160 (AEI22_06140) cdsA 1181892..1182617 (-) 726 WP_052861644.1 phosphatidate cytidylyltransferase -
  AEI22_RS06165 (AEI22_06145) - 1182626..1182964 (-) 339 WP_002852397.1 hypothetical protein -
  AEI22_RS06170 (AEI22_06150) - 1182966..1184273 (-) 1308 WP_115794608.1 NFACT family protein -
  AEI22_RS06175 (AEI22_06155) mobA 1184335..1184910 (+) 576 WP_002858185.1 molybdenum cofactor guanylyltransferase -
  AEI22_RS06180 (AEI22_06160) pldA 1184907..1185896 (+) 990 WP_103627923.1 phospholipase A -
  AEI22_RS06185 (AEI22_06165) ceuB 1185982..1186950 (+) 969 WP_115794609.1 ABC transporter permease Machinery gene
  AEI22_RS06190 (AEI22_06170) ceuC 1186943..1187881 (+) 939 WP_002854141.1 iron chelate uptake ABC transporter family permease subunit -
  AEI22_RS06195 (AEI22_06175) ceuD 1187878..1188633 (+) 756 WP_002927445.1 ABC transporter ATP-binding protein -
  AEI22_RS06200 (AEI22_06180) ceuB 1188646..1189638 (+) 993 WP_044306199.1 enterochelin ABC transporter substrate-binding protein CeuB -
  AEI22_RS06210 (AEI22_06190) - 1189864..1190418 (-) 555 WP_052794237.1 hypothetical protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35454.35 Da        Isoelectric Point: 9.6678

>NTDB_id=152489 AEI22_RS06185 WP_115794609.1 1185982..1186950(+) (ceuB) [Campylobacter jejuni strain CJ090CC1332]
MFFKHILNLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSTCGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=152489 AEI22_RS06185 WP_115794609.1 1185982..1186950(+) (ceuB) [Campylobacter jejuni strain CJ090CC1332]
TTGTTTTTTAAGCATATATTGAATTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTACATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTGCTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

98.758

100

0.988

Multiple sequence alignment