Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI20_RS06610 | Genome accession | NZ_CP012217 |
| Coordinates | 1234950..1235252 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CJ071CC464 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1229950..1240252
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI20_RS06585 (AEI20_06615) | rpsR | 1230313..1230573 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI20_RS06590 (AEI20_06620) | lon | 1230633..1233008 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| AEI20_RS06595 (AEI20_06625) | - | 1233025..1233672 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| AEI20_RS06600 (AEI20_06630) | fliW | 1233833..1234222 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI20_RS06605 (AEI20_06635) | proC | 1234222..1234953 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI20_RS06610 (AEI20_06640) | ctsT | 1234950..1235252 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| AEI20_RS06615 (AEI20_06645) | - | 1235249..1235911 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| AEI20_RS06620 (AEI20_06650) | - | 1235908..1236360 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| AEI20_RS06625 (AEI20_06655) | hemD | 1236357..1236986 (-) | 630 | WP_002869541.1 | uroporphyrinogen-III synthase | - |
| AEI20_RS06630 (AEI20_06660) | thiE | 1236964..1237596 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| AEI20_RS06635 (AEI20_06665) | thiD | 1237586..1238398 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI20_RS06640 (AEI20_06670) | - | 1238395..1239081 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| AEI20_RS06645 (AEI20_06675) | - | 1239078..1239839 (-) | 762 | WP_032585146.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=152458 AEI20_RS06610 WP_002853046.1 1234950..1235252(+) (ctsT) [Campylobacter jejuni strain CJ071CC464]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152458 AEI20_RS06610 WP_002853046.1 1234950..1235252(+) (ctsT) [Campylobacter jejuni strain CJ071CC464]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |