Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | AEI17_RS07660 | Genome accession | NZ_CP012216 |
| Coordinates | 1468674..1469633 (+) | Length | 319 a.a. |
| NCBI ID | WP_004308620.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ074CC443 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1447321..1478970 | 1468674..1469633 | within | 0 |
Gene organization within MGE regions
Location: 1447321..1478970
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI17_RS07540 (AEI17_07605) | pglI | 1447321..1448250 (-) | 930 | WP_002860218.1 | GalNAc(5)-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase | - |
| AEI17_RS07545 (AEI17_07610) | pglH | 1448243..1449322 (-) | 1080 | WP_079268903.1 | GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)- diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase | - |
| AEI17_RS07550 (AEI17_07615) | pglK | 1449319..1451013 (-) | 1695 | WP_052789827.1 | ABC-type lipopolysaccharide transporter PglK | - |
| AEI17_RS07555 (AEI17_07620) | galE | 1451007..1451993 (-) | 987 | WP_002874249.1 | UDP-glucose 4-epimerase GalE | - |
| AEI17_RS07560 (AEI17_07625) | - | 1452052..1452846 (-) | 795 | WP_020247039.1 | 3'-5' exonuclease | - |
| AEI17_RS07565 (AEI17_07630) | waaC | 1452913..1453941 (+) | 1029 | WP_020247040.1 | lipopolysaccharide heptosyltransferase I | - |
| AEI17_RS07570 (AEI17_07635) | htrB | 1453931..1454809 (+) | 879 | WP_052789826.1 | lipid A biosynthesis lauroyl acyltransferase HtrB | - |
| AEI17_RS07575 (AEI17_07640) | - | 1454806..1455507 (+) | 702 | WP_002869594.1 | glycosyltransferase family 2 protein | - |
| AEI17_RS07580 (AEI17_07645) | rfbA | 1455518..1456396 (+) | 879 | WP_115769703.1 | glucose-1-phosphate thymidylyltransferase RfbA | - |
| AEI17_RS07585 (AEI17_07650) | rfbB | 1456396..1457427 (+) | 1032 | WP_002860226.1 | dTDP-glucose 4,6-dehydratase | - |
| AEI17_RS07590 (AEI17_07655) | wlaRA | 1457430..1457879 (+) | 450 | WP_002912325.1 | class E lipooligosaccharide biosynthesis 3,4-ketoisomerase WlaRA | - |
| AEI17_RS07595 (AEI17_07660) | wlaRB | 1457876..1458280 (+) | 405 | WP_002860228.1 | class E lipooligosaccharide biosynthesis 3,4-ketoisomerase WlaRB | - |
| AEI17_RS07600 (AEI17_07665) | - | 1458270..1458713 (+) | 444 | WP_020247173.1 | acyltransferase | - |
| AEI17_RS07605 (AEI17_07670) | - | 1458735..1459262 (+) | 528 | WP_002869598.1 | GNAT family N-acetyltransferase | - |
| AEI17_RS07615 (AEI17_07675) | - | 1459559..1460623 (+) | 1065 | WP_002869599.1 | glycosyltransferase family A protein | - |
| AEI17_RS07620 (AEI17_07680) | - | 1460636..1461688 (+) | 1053 | WP_052789825.1 | glycosyltransferase family 2 protein | - |
| AEI17_RS07625 (AEI17_07685) | wlaRG | 1461654..1462739 (+) | 1086 | WP_025998025.1 | class E lipooligosaccharide biosynthesis aminotransferase WlaRG | - |
| AEI17_RS07630 (AEI17_07690) | - | 1462766..1464025 (-) | 1260 | WP_002869603.1 | DUF2972 domain-containing protein | - |
| AEI17_RS09335 (AEI17_07695) | - | 1464022..1465045 (-) | 1024 | Protein_1495 | hypothetical protein | - |
| AEI17_RS07640 (AEI17_07700) | - | 1465116..1465889 (+) | 774 | WP_002869611.1 | glycosyltransferase family 25 protein | - |
| AEI17_RS07645 (AEI17_07705) | wlaTB | 1465882..1466838 (+) | 957 | WP_002869613.1 | class E lipooligosaccharide biosynthesis protein WlaTB | - |
| AEI17_RS07650 (AEI17_07710) | yibB | 1466835..1467794 (+) | 960 | WP_002869615.1 | protein YibB | - |
| AEI17_RS07655 (AEI17_07715) | waaV | 1467797..1468615 (-) | 819 | WP_002869617.1 | glycosyltransferase family 2 protein | - |
| AEI17_RS07660 (AEI17_07720) | waaF | 1468674..1469633 (+) | 960 | WP_004308620.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| AEI17_RS07665 (AEI17_07725) | gmhA | 1469614..1470174 (-) | 561 | WP_002869619.1 | D-sedoheptulose 7-phosphate isomerase | - |
| AEI17_RS07670 (AEI17_07730) | rfaE1 | 1470171..1471556 (-) | 1386 | WP_002867399.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| AEI17_RS07675 (AEI17_07735) | rfaD | 1471549..1472502 (-) | 954 | WP_002867398.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| AEI17_RS07680 (AEI17_07740) | gmhB | 1472503..1473064 (-) | 562 | Protein_1504 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| AEI17_RS07685 (AEI17_07745) | - | 1473145..1473447 (+) | 303 | WP_002852762.1 | cytochrome c | - |
| AEI17_RS07690 (AEI17_07750) | ccoS | 1473470..1473676 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
| AEI17_RS07695 (AEI17_07755) | - | 1473673..1476030 (-) | 2358 | WP_079268904.1 | heavy metal translocating P-type ATPase | - |
| AEI17_RS07700 (AEI17_07760) | rho | 1476139..1477437 (+) | 1299 | WP_002852852.1 | transcription termination factor Rho | - |
| AEI17_RS07705 (AEI17_07765) | dnaX | 1477441..1478970 (+) | 1530 | WP_044258566.1 | DNA polymerase III subunit gamma/tau | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 36751.47 Da Isoelectric Point: 10.3520
>NTDB_id=152442 AEI17_RS07660 WP_004308620.1 1468674..1469633(+) (waaF) [Campylobacter jejuni strain CJ074CC443]
MKIFIHLPTWLGDAVMASPALYVIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFNQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEAKNLLKNPHL
MKIFIHLPTWLGDAVMASPALYVIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFNQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEAKNLLKNPHL
Nucleotide
Download Length: 960 bp
>NTDB_id=152442 AEI17_RS07660 WP_004308620.1 1468674..1469633(+) (waaF) [Campylobacter jejuni strain CJ074CC443]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGTTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAACCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAAAAATTTACTTAAAAACCCTCATCTATAA
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGTTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAACCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAAAAATTTACTTAAAAACCCTCATCTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
94.671 |
100 |
0.947 |