Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AEI17_RS02005 Genome accession   NZ_CP012216
Coordinates   371924..372892 (+) Length   322 a.a.
NCBI ID   WP_020247096.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ074CC443     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 366924..377892
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI17_RS01980 (AEI17_01985) cdsA 367834..368559 (-) 726 WP_002888102.1 phosphatidate cytidylyltransferase -
  AEI17_RS01985 (AEI17_01990) - 368568..368906 (-) 339 WP_002852397.1 hypothetical protein -
  AEI17_RS01990 (AEI17_01995) - 368908..370215 (-) 1308 WP_070300716.1 NFACT family protein -
  AEI17_RS01995 (AEI17_02000) mobA 370277..370852 (+) 576 WP_002884175.1 molybdenum cofactor guanylyltransferase -
  AEI17_RS02000 (AEI17_02005) pldA 370849..371838 (+) 990 WP_002860788.1 phospholipase A -
  AEI17_RS02005 (AEI17_02010) ceuB 371924..372892 (+) 969 WP_020247096.1 ABC transporter permease Machinery gene
  AEI17_RS02010 (AEI17_02015) ceuC 372885..373823 (+) 939 WP_002884174.1 iron chelate uptake ABC transporter family permease subunit -
  AEI17_RS02015 (AEI17_02020) ceuD 373820..374575 (+) 756 WP_002884173.1 ABC transporter ATP-binding protein -
  AEI17_RS02020 (AEI17_02025) ceuB 374588..375580 (+) 993 WP_002884171.1 enterochelin ABC transporter substrate-binding protein CeuB -
  AEI17_RS02030 (AEI17_02035) - 375806..376360 (-) 555 WP_002884169.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35411.32 Da        Isoelectric Point: 9.6678

>NTDB_id=152424 AEI17_RS02005 WP_020247096.1 371924..372892(+) (ceuB) [Campylobacter jejuni strain CJ074CC443]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=152424 AEI17_RS02005 WP_020247096.1 371924..372892(+) (ceuB) [Campylobacter jejuni strain CJ074CC443]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.689

100

0.997

Multiple sequence alignment