Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI13_RS04480 | Genome accession | NZ_CP012215 |
| Coordinates | 865255..865557 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CJ518CC45 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 860255..870557
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI13_RS04455 (AEI13_04485) | rpsR | 860618..860878 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI13_RS04460 (AEI13_04490) | lon | 860938..863313 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| AEI13_RS04465 (AEI13_04495) | bamD | 863330..863977 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| AEI13_RS04470 (AEI13_04500) | fliW | 864138..864527 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI13_RS04475 (AEI13_04505) | proC | 864527..865258 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI13_RS04480 (AEI13_04510) | ctsT | 865255..865557 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| AEI13_RS04485 (AEI13_04515) | - | 865554..866216 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| AEI13_RS04490 (AEI13_04520) | - | 866213..866665 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| AEI13_RS04495 (AEI13_04525) | hemD | 866662..867291 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| AEI13_RS04500 (AEI13_04530) | thiE | 867269..867901 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| AEI13_RS04505 (AEI13_04535) | thiD | 867891..868703 (-) | 813 | WP_002871792.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI13_RS04510 (AEI13_04540) | - | 868700..869386 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| AEI13_RS04515 (AEI13_04545) | - | 869383..870144 (-) | 762 | WP_002871793.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=152400 AEI13_RS04480 WP_002853046.1 865255..865557(+) (ctsT) [Campylobacter jejuni strain CJ518CC45]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152400 AEI13_RS04480 WP_002853046.1 865255..865557(+) (ctsT) [Campylobacter jejuni strain CJ518CC45]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |