Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AEI15_RS06370 Genome accession   NZ_CP012214
Coordinates   1214465..1215433 (+) Length   322 a.a.
NCBI ID   WP_002882700.1    Uniprot ID   A0A690GGM2
Organism   Campylobacter jejuni strain CJ088CC52     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1209465..1220433
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI15_RS06345 (AEI15_06325) cdsA 1210375..1211100 (-) 726 WP_002884177.1 phosphatidate cytidylyltransferase -
  AEI15_RS06350 (AEI15_06330) - 1211109..1211447 (-) 339 WP_002875268.1 hypothetical protein -
  AEI15_RS06355 (AEI15_06335) - 1211449..1212756 (-) 1308 WP_002884176.1 NFACT family protein -
  AEI15_RS06360 (AEI15_06340) mobA 1212818..1213393 (+) 576 WP_002884175.1 molybdenum cofactor guanylyltransferase -
  AEI15_RS06365 (AEI15_06345) pldA 1213390..1214379 (+) 990 WP_002860788.1 phospholipase A -
  AEI15_RS06370 (AEI15_06350) ceuB 1214465..1215433 (+) 969 WP_002882700.1 ABC transporter permease Machinery gene
  AEI15_RS06375 (AEI15_06355) ceuC 1215426..1216364 (+) 939 WP_002884174.1 iron chelate uptake ABC transporter family permease subunit -
  AEI15_RS06380 (AEI15_06360) ceuD 1216361..1217116 (+) 756 WP_002884173.1 ABC transporter ATP-binding protein -
  AEI15_RS06385 (AEI15_06365) ceuB 1217129..1218121 (+) 993 WP_002884171.1 enterochelin ABC transporter substrate-binding protein CeuB -
  AEI15_RS06395 (AEI15_06375) - 1218347..1218901 (-) 555 WP_002884169.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35441.35 Da        Isoelectric Point: 9.6678

>NTDB_id=152382 AEI15_RS06370 WP_002882700.1 1214465..1215433(+) (ceuB) [Campylobacter jejuni strain CJ088CC52]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFTGASFFTQAIIASIFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKA
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=152382 AEI15_RS06370 WP_002882700.1 1214465..1215433(+) (ceuB) [Campylobacter jejuni strain CJ088CC52]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACAGGAATGAGTCTTAGTATATGTGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCCCCAACTACAGCAGGGACCATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTACTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTATATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGAATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTGCTAAAAAGGAAAGCT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A690GGM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994

Multiple sequence alignment