Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI15_RS05050 | Genome accession | NZ_CP012214 |
| Coordinates | 954759..955061 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CJ088CC52 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 949759..960061
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI15_RS05025 (AEI15_05030) | rpsR | 950121..950381 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI15_RS05030 (AEI15_05035) | lon | 950442..952817 (-) | 2376 | WP_002885146.1 | endopeptidase La | - |
| AEI15_RS05035 (AEI15_05040) | - | 952834..953481 (-) | 648 | WP_012006727.1 | outer membrane protein assembly factor BamD | - |
| AEI15_RS05040 (AEI15_05045) | fliW | 953642..954031 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI15_RS05045 (AEI15_05050) | proC | 954031..954762 (+) | 732 | WP_002885405.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI15_RS05050 (AEI15_05055) | ctsT | 954759..955061 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| AEI15_RS05055 (AEI15_05060) | - | 955058..955720 (+) | 663 | WP_002859149.1 | hypothetical protein | - |
| AEI15_RS05060 (AEI15_05065) | - | 955717..956169 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| AEI15_RS05065 (AEI15_05070) | hemD | 956166..956795 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| AEI15_RS05070 (AEI15_05075) | thiE | 956773..957405 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| AEI15_RS05075 (AEI15_05080) | thiD | 957395..958207 (-) | 813 | WP_002885404.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI15_RS05080 (AEI15_05085) | - | 958204..958890 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| AEI15_RS05085 (AEI15_05090) | - | 958887..959648 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=152375 AEI15_RS05050 WP_002853046.1 954759..955061(+) (ctsT) [Campylobacter jejuni strain CJ088CC52]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152375 AEI15_RS05050 WP_002853046.1 954759..955061(+) (ctsT) [Campylobacter jejuni strain CJ088CC52]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |