Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI08_RS05030 | Genome accession | NZ_CP012213 |
| Coordinates | 950227..950529 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CJ513CC45 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 945227..955529
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI08_RS05005 (AEI08_04975) | rpsR | 945590..945850 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AEI08_RS05010 (AEI08_04980) | lon | 945910..948285 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| AEI08_RS05015 (AEI08_04985) | - | 948302..948949 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| AEI08_RS05020 (AEI08_04990) | fliW | 949110..949499 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI08_RS05025 (AEI08_04995) | proC | 949499..950230 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI08_RS05030 (AEI08_05000) | ctsT | 950227..950529 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| AEI08_RS05035 (AEI08_05005) | - | 950526..951188 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| AEI08_RS05040 (AEI08_05010) | - | 951185..951637 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| AEI08_RS05045 (AEI08_05015) | hemD | 951634..952263 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| AEI08_RS05050 (AEI08_05020) | thiE | 952241..952873 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| AEI08_RS05055 (AEI08_05025) | thiD | 952863..953675 (-) | 813 | WP_002871792.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI08_RS05060 (AEI08_05030) | - | 953672..954358 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| AEI08_RS05065 (AEI08_05035) | - | 954355..955116 (-) | 762 | WP_002871793.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=152348 AEI08_RS05030 WP_002853046.1 950227..950529(+) (ctsT) [Campylobacter jejuni strain CJ513CC45]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152348 AEI08_RS05030 WP_002853046.1 950227..950529(+) (ctsT) [Campylobacter jejuni strain CJ513CC45]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |