Detailed information NTG0152308

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CJJRM1285_RS05900
• Genome accession: NZ_CP015209
• Coordinates: 1127548..1128507 (+)
• Length: 319 a.a.
• NCBI ID: WP_002856368.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain RM1285
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1122548..1133507

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJJRM1285_RS05875 (CjjRM1285_1157)	neuB	1123047..1124087 (+)	1041	WP_002870496.1	N-acetylneuraminate synthase	-
CJJRM1285_RS05880 (CjjRM1285_1158)	neuC	1124084..1125202 (+)	1119	WP_002911676.1	UDP-N-acetylglucosamine 2-epimerase	-
CJJRM1285_RS05885 (CjjRM1285_1159)	-	1125199..1125864 (+)	666	WP_002855897.1	cytidylyltransferase domain-containing protein	-
CJJRM1285_RS05890 (CjjRM1285_1160)	-	1125987..1126685 (+)	699	WP_236841646.1	CatB-related O-acetyltransferase	-
CJJRM1285_RS05895 (CjjRM1285_1161)	waaV	1126677..1127489 (-)	813	WP_002856066.1	glycosyltransferase family 2 protein	-
CJJRM1285_RS05900 (CjjRM1285_1162)	waaF	1127548..1128507 (+)	960	WP_002856368.1	lipopolysaccharide heptosyltransferase II	Regulator
CJJRM1285_RS05905 (CjjRM1285_1163)	gmhA	1128488..1129048 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
CJJRM1285_RS05910 (CjjRM1285_1164)	rfaE1	1129045..1130430 (-)	1386	WP_002856251.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CJJRM1285_RS05915 (CjjRM1285_1165)	rfaD	1130423..1131376 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
CJJRM1285_RS05920 (CjjRM1285_1166)	gmhB	1131377..1131937 (-)	561	WP_002911679.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
CJJRM1285_RS05925 (CjjRM1285_1167)	-	1132019..1132321 (+)	303	WP_002852762.1	c-type cytochrome	-
CJJRM1285_RS05930 (CjjRM1285_1168)	ccoS	1132344..1132550 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36719.17 Da
• Isoelectric Point: 10.1941

>NTDB_id=152308 CJJRM1285_RS05900 WP_002856368.1 1127548..1128507(+) (waaF) [Campylobacter jejuni subsp. jejuni strain RM1285]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=152308 CJJRM1285_RS05900 WP_002856368.1 1127548..1128507(+) (waaF) [Campylobacter jejuni subsp. jejuni strain RM1285]
ATGAAAATTTTTATACACCTTCCAACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAACTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.611	100	0.956