Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | AEI01_RS05420 | Genome accession | NZ_CP012211 |
| Coordinates | 1033063..1034013 (+) | Length | 316 a.a. |
| NCBI ID | WP_002866164.1 | Uniprot ID | Q9ALT6 |
| Organism | Campylobacter jejuni strain CJ031CC45 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1011705..1039581 | 1033063..1034013 | within | 0 |
Gene organization within MGE regions
Location: 1011705..1039581
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI01_RS05305 (AEI01_05285) | pglI | 1011705..1012634 (-) | 930 | WP_002866141.1 | GalNAc(5)-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase | - |
| AEI01_RS05310 (AEI01_05290) | pglH | 1012627..1013706 (-) | 1080 | WP_072238645.1 | GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)- diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase | - |
| AEI01_RS05315 (AEI01_05295) | pglK | 1013703..1015397 (-) | 1695 | WP_002877063.1 | ABC-type lipopolysaccharide transporter PglK | - |
| AEI01_RS05320 (AEI01_05300) | galE | 1015391..1016377 (-) | 987 | WP_002877060.1 | UDP-glucose 4-epimerase GalE | - |
| AEI01_RS05325 (AEI01_05305) | - | 1016436..1017230 (-) | 795 | WP_002866144.1 | 3'-5' exonuclease | - |
| AEI01_RS05330 (AEI01_05310) | waaC | 1017296..1018324 (+) | 1029 | WP_002866145.1 | lipopolysaccharide heptosyltransferase I | - |
| AEI01_RS05335 (AEI01_05315) | htrB | 1018314..1019192 (+) | 879 | WP_032603536.1 | lipid A biosynthesis lauroyl acyltransferase HtrB | - |
| AEI01_RS05340 (AEI01_05320) | - | 1019189..1019890 (+) | 702 | WP_002877056.1 | glycosyltransferase family 2 protein | - |
| AEI01_RS05345 (AEI01_05325) | rfbA | 1019901..1020779 (+) | 879 | WP_002866148.1 | glucose-1-phosphate thymidylyltransferase RfbA | - |
| AEI01_RS05350 (AEI01_05330) | rfbB | 1020779..1021810 (+) | 1032 | WP_002866149.1 | dTDP-glucose 4,6-dehydratase | - |
| AEI01_RS05355 (AEI01_05335) | wlaRA | 1021813..1022262 (+) | 450 | WP_052776004.1 | class E lipooligosaccharide biosynthesis 3,4-ketoisomerase WlaRA | - |
| AEI01_RS05360 (AEI01_05340) | wlaRB | 1022259..1022666 (+) | 408 | WP_002866152.1 | class E lipooligosaccharide biosynthesis 3,4-ketoisomerase WlaRB | - |
| AEI01_RS05365 (AEI01_05345) | - | 1022656..1023090 (+) | 435 | WP_032603537.1 | acyltransferase | - |
| AEI01_RS05370 (AEI01_05350) | wlaRD | 1023120..1023938 (+) | 819 | WP_002866154.1 | class E lipooligosaccharide biosynthesis sugar-formyltransferase WlaRD | - |
| AEI01_RS05375 (AEI01_05355) | - | 1023957..1025021 (+) | 1065 | WP_002866155.1 | glycosyltransferase family 2 protein | - |
| AEI01_RS05380 (AEI01_05360) | - | 1025033..1026085 (+) | 1053 | WP_115786743.1 | glycosyltransferase family A protein | - |
| AEI01_RS05385 (AEI01_05365) | wlaRG | 1026051..1027136 (+) | 1086 | WP_032603539.1 | class E lipooligosaccharide biosynthesis aminotransferase WlaRG | - |
| AEI01_RS05390 (AEI01_05370) | - | 1027170..1028423 (-) | 1254 | WP_002866158.1 | DUF2972 domain-containing protein | - |
| AEI01_RS05395 (AEI01_05375) | - | 1028420..1029322 (-) | 903 | WP_002866159.1 | hypothetical protein | - |
| AEI01_RS05400 (AEI01_05380) | - | 1029505..1030278 (+) | 774 | WP_002866160.1 | glycosyltransferase family 25 protein | - |
| AEI01_RS05405 (AEI01_05385) | wlaTB | 1030271..1031227 (+) | 957 | WP_002869613.1 | class E lipooligosaccharide biosynthesis protein WlaTB | - |
| AEI01_RS05410 (AEI01_05390) | wlaTC | 1031224..1032183 (+) | 960 | WP_012006735.1 | class E lipooligosaccharide biosynthesis protein WlaTC | - |
| AEI01_RS05415 (AEI01_05395) | - | 1032186..1033004 (-) | 819 | WP_002866163.1 | glycosyltransferase family 2 protein | - |
| AEI01_RS05420 (AEI01_05400) | waaF | 1033063..1034013 (+) | 951 | WP_002866164.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| AEI01_RS05425 (AEI01_05405) | - | 1034065..1035564 (+) | 1500 | WP_002877116.1 | MBOAT family O-acyltransferase | - |
| AEI01_RS05430 (AEI01_05410) | - | 1035712..1036689 (+) | 978 | WP_002866168.1 | hypothetical protein | - |
| AEI01_RS05435 (AEI01_05415) | gmhA | 1036693..1037253 (-) | 561 | WP_002877119.1 | D-sedoheptulose 7-phosphate isomerase | - |
| AEI01_RS05440 (AEI01_05420) | rfaE1 | 1037250..1038635 (-) | 1386 | WP_002877121.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| AEI01_RS05445 (AEI01_05425) | rfaD | 1038628..1039581 (-) | 954 | WP_002877123.1 | ADP-glyceromanno-heptose 6-epimerase | - |
Sequence
Protein
Download Length: 316 a.a. Molecular weight: 36378.95 Da Isoelectric Point: 10.3102
>NTDB_id=152297 AEI01_RS05420 WP_002866164.1 1033063..1034013(+) (waaF) [Campylobacter jejuni strain CJ031CC45]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNTQFILYGSLVSTALFREFPNSKIIIENKQTRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISTVYKIKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEEIKKLSTP
MKIFIHLPTWLGDAVMASPALYAIKEHFKNTQFILYGSLVSTALFREFPNSKIIIENKQTRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISTVYKIKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEEIKKLSTP
Nucleotide
Download Length: 951 bp
>NTDB_id=152297 AEI01_RS05420 WP_002866164.1 1033063..1034013(+) (waaF) [Campylobacter jejuni strain CJ031CC45]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATACCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAGGGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAAACCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTACGGTTTATAAGATAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGTCCTTTAAAGC
ACCATAAATGCATGAAAGATCTAAAGCCTGAAAAGGTGATAGAAGAAATTAAAAAATTAAGCACTCCATAA
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATACCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAGGGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAAACCCGCTACAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTACGGTTTATAAGATAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGTCCTTTAAAGC
ACCATAAATGCATGAAAGATCTAAAGCCTGAAAAGGTGATAGAAGAAATTAAAAAATTAAGCACTCCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
94.249 |
99.051 |
0.934 |