Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AEI01_RS05055 | Genome accession | NZ_CP012211 |
| Coordinates | 961838..962140 (+) | Length | 100 a.a. |
| NCBI ID | WP_002866102.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ031CC45 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 956838..967140
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AEI01_RS05030 (AEI01_05010) | rpsR | 957200..957460 (+) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
| AEI01_RS05035 (AEI01_05015) | lon | 957521..959896 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| AEI01_RS05040 (AEI01_05020) | - | 959913..960560 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| AEI01_RS05045 (AEI01_05025) | fliW | 960721..961110 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AEI01_RS05050 (AEI01_05030) | proC | 961110..961841 (+) | 732 | WP_115786705.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AEI01_RS05055 (AEI01_05035) | ctsT | 961838..962140 (+) | 303 | WP_002866102.1 | type II secretion system protein | Machinery gene |
| AEI01_RS05060 (AEI01_05040) | - | 962137..962799 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| AEI01_RS05065 (AEI01_05045) | - | 962796..963248 (+) | 453 | WP_032603535.1 | hypothetical protein | - |
| AEI01_RS05070 (AEI01_05050) | hemD | 963245..963874 (-) | 630 | WP_002866105.1 | uroporphyrinogen-III synthase | - |
| AEI01_RS05075 (AEI01_05055) | thiE | 963852..964484 (-) | 633 | WP_002866106.1 | thiamine phosphate synthase | - |
| AEI01_RS05080 (AEI01_05060) | thiD | 964474..965286 (-) | 813 | WP_002866107.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AEI01_RS05085 (AEI01_05065) | - | 965283..965969 (-) | 687 | WP_002866108.1 | endonuclease III domain-containing protein | - |
| AEI01_RS05090 (AEI01_05070) | - | 965966..966727 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12149.27 Da Isoelectric Point: 9.0653
>NTDB_id=152295 AEI01_RS05055 WP_002866102.1 961838..962140(+) (ctsT) [Campylobacter jejuni strain CJ031CC45]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYKKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYKKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=152295 AEI01_RS05055 WP_002866102.1 961838..962140(+) (ctsT) [Campylobacter jejuni strain CJ031CC45]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATAAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATAAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |