Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   AEI01_RS03160 Genome accession   NZ_CP012211
Coordinates   593528..593965 (+) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain CJ031CC45     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 588528..598965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI01_RS03140 (AEI01_03115) kdpD 589016..590947 (+) 1932 WP_002866527.1 sensor histidine kinase KdpD -
  AEI01_RS03145 (AEI01_03120) uvrB 590942..592915 (-) 1974 WP_002898591.1 excinuclease ABC subunit UvrB -
  AEI01_RS03150 (AEI01_03125) - 593069..593299 (+) 231 WP_002852327.1 hypothetical protein -
  AEI01_RS03155 (AEI01_03130) - 593289..593531 (+) 243 WP_002854947.1 hypothetical protein -
  AEI01_RS03160 (AEI01_03135) Cj0683 593528..593965 (+) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI01_RS03165 (AEI01_03140) priA 593947..595800 (+) 1854 WP_002866530.1 primosomal protein N' -
  AEI01_RS03170 (AEI01_03145) cipA 595810..597205 (-) 1396 Protein_608 DUF2972 domain-containing protein -
  AEI01_RS03175 (AEI01_03150) - 597216..597740 (-) 525 WP_002876965.1 adenylyl-sulfate kinase -
  AEI01_RS03180 (AEI01_03155) ispG 597863..598936 (+) 1074 WP_002854766.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=152292 AEI01_RS03160 WP_002852324.1 593528..593965(+) (Cj0683) [Campylobacter jejuni strain CJ031CC45]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=152292 AEI01_RS03160 WP_002852324.1 593528..593965(+) (Cj0683) [Campylobacter jejuni strain CJ031CC45]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCACAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAATGCTAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AATGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1

Multiple sequence alignment